Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0623 ATGTTGGAGGATCGAAGGCTGGTGCTGGTGTTCATCAGCACCTGCATTCTGGGTTGGATGCCCATTTCAATCAATGGTGCCACGGATCCAAATGATGCTGCTGCTCTAAGTGTCTTGTTTAGCAGTATGAACTCACCGTCCCAGCTAGGTTGGCCTGCAAATGGTGATCCGTGTGGGCAGTCCTGGAAAGGCATTACTTGCTCAGACAACCGAGTCACAGAGATTAAGTTACCTGGCCTTGCGCTAACTGGATCATTGGGCTACCAGTTACAAGCCTTGACATCTGTGACCAACCTAGACATGAGCAACAATAATCTTGGAGGCACTATACCTTATCAACTTCCTCAAAATGTGCAGCGATTAAATCTTGCTAATAATAACTTCACTGGAGGGGTCCCTTATTCCATTTCTAATATGACTTCTCTTACATACCTGAATCTTGGTCACAATCAACTACAGGAAGGACTGAGTGTCAACTTTGAAAAACTTTCTTCACTCTCCACATTGGATCTCTCTTTCAATACTGTGTCAGGTGACCTCCCTCAGAGTTTCGTCTCACTTTCAAGCATGACCACCATGTATCTGCAAAACAACCAGTTTACAGGCACAATTGATGTCCTTGCCAACCTTCCTCTTGAAAATCTGAATGTGGAAAACAACCATTTTACAGGATGGATACCAGAACAATTGCAAAACATAAACCTACAGAAGGATAATAATGCATGGAGCTCTGGGCCTGCACCCCCGCCTCCTCCTGGGGCACCTCCTGTGACTAAAAAGACCCGAAATCACAAATCCGGTGGCCATGGAAGTAACACCCCCTCAGATGCTGTTACCAGTGATGGAGGCAAGAAATCTGGTATAGGAGGTGCTACCATTGCTGGAATAGCGGTCTCCATCCTTGTTGTTGGAGCAATAATAGCGTTCTTTCTGATGAAGAGAAGATCCAGGAAGTCTTCTTCTGATTTAGAAAATATTGACAATCAGCCCTTTGCTCCTCTCACTTCAAATGAAGTGCATGAAATGAAGTCTGTGCAAACTTCCTCAGTTCTTGACATGAAGACATTCAATACTTCTGCCTCAATAAATCTTAAACCTGTGCAAACTTCCTCTGTTCTTGACATGAAGACATTCAATTCTTCTGCCTCAATAAATCTTAAACCCCCGCCTATTGATCGTAACAAATCATTTGATGACGATGAATTTCCAAAGAAGCCCATTATTGTGAAGAAGACTGTAACAGCTCCTGCAAATGTAAAATTATATTCTATAGCAGACCTACAGATTGCTACTGGCAGCTTCAGTGTAGATCAGCTTCTTGGTGAGGGATCTTTTGGACGTGTTTACCGTGCTCAGTTTGATGATGGAAAGGTTCTTGCTGTGAAGAAGATTGATTCATCTGTCCTTTCCAGTGATTTGTCTGAAGATTTTACAGAAATAGTTTCGAACATCTCCCAGTTGCATCATCCAAATGTGACAGAGCTTGTTGGTTATTGTTCAGAGCATGGACAACATCTCCTAGTCTCTGAGTTTCATAAAAATGGATCACTGCACGACTTCCTTCACCTGCCAGATGAATATAGCAAGCCATTGATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTTTAGAGTACCTTCATGAAGTTTGTTCACCATCAGTTATTCATAAAAATATTAAATCAGCCAACATATTGCTTGATGTGGAGCTTAATCCTCATCTTTCAGACAGTGGATTGGCAAGCTATATTCCAAATGCAGACCAGGTATTGAACCAAAATGCTGGATCTGGATATGAAGCACCTGAAGTTGCCTTGTCTGGTCAGTATACTCTGAAGAGTGATATCTACAGCTTTGGAGTTGTCATGTTGGAGCTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGACCTGAGCAGTCTTTGGTTCGATGGGCAACGCCACAACTTCATGATATTGATGCATTGGCTAAAATGGTTGATCCCGTGCTGGAAGGGCTATACCCTGTCAAGTCTCTTTCTCGCTTTGCTGATGTTATTGCTCTTTGCGTTCAGCCGGAGCCTGAATTCCGACCACCGATGTCAGAAGTGGTTCAAGCATTGGTTCGATTAGTGCAGCGAGCTAACATGAGCAAGCGAACAATTGGAACTGACCTTGGAGGATCCCAACGAAGTGACCATGGAGGATCCCAACGGGGAGGTGATCACCCGGAGACACAAGACATGTAA 2244 0.4381 MLEDRRLVLVFISTCILGWMPISINGATDPNDAAALSVLFSSMNSPSQLGWPANGDPCGQSWKGITCSDNRVTEIKLPGLALTGSLGYQLQALTSVTNLDMSNNNLGGTIPYQLPQNVQRLNLANNNFTGGVPYSISNMTSLTYLNLGHNQLQEGLSVNFEKLSSLSTLDLSFNTVSGDLPQSFVSLSSMTTMYLQNNQFTGTIDVLANLPLENLNVENNHFTGWIPEQLQNINLQKDNNAWSSGPAPPPPPGAPPVTKKTRNHKSGGHGSNTPSDAVTSDGGKKSGIGGATIAGIAVSILVVGAIIAFFLMKRRSRKSSSDLENIDNQPFAPLTSNEVHEMKSVQTSSVLDMKTFNTSASINLKPVQTSSVLDMKTFNSSASINLKPPPIDRNKSFDDDEFPKKPIIVKKTVTAPANVKLYSIADLQIATGSFSVDQLLGEGSFGRVYRAQFDDGKVLAVKKIDSSVLSSDLSEDFTEIVSNISQLHHPNVTELVGYCSEHGQHLLVSEFHKNGSLHDFLHLPDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVIHKNIKSANILLDVELNPHLSDSGLASYIPNADQVLNQNAGSGYEAPEVALSGQYTLKSDIYSFGVVMLELLSGRKPFDSSRPRPEQSLVRWATPQLHDIDALAKMVDPVLEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTIGTDLGGSQRSDHGGSQRGGDHPETQDM 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0623 747 SUPERFAMILY L domain-like 48 232 - -
Glsi07g0623 747 Gene3D Transferase(Phosphotransferase) domain 1 513 725 - -
Glsi07g0623 747 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 398 511 - -
Glsi07g0623 747 PANTHER LEUCINE RICH REPEAT KINASE 2 68 712 - -
Glsi07g0623 747 MobiDBLite consensus disorder prediction 718 733 - -
Glsi07g0623 747 MobiDBLite consensus disorder prediction 718 747 - -
Glsi07g0623 747 MobiDBLite consensus disorder prediction 323 339 - -
Glsi07g0623 747 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 512 720 - -
Glsi07g0623 747 ProSiteProfiles Protein kinase domain profile. 434 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0623 747 Gene3D Phosphorylase Kinase; domain 1 402 511 - -
Glsi07g0623 747 Pfam Leucine rich repeat 95 152 IPR001611 GO:0005515
Glsi07g0623 747 CDD TM_EGFR-like 286 318 - -
Glsi07g0623 747 SUPERFAMILY Protein kinase-like (PK-like) 416 706 IPR011009 -
Glsi07g0623 747 Gene3D Ribonuclease Inhibitor 179 244 IPR032675 -
Glsi07g0623 747 MobiDBLite consensus disorder prediction 238 283 - -
Glsi07g0623 747 SMART serkin_6 434 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0623 747 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Glsi07g0623 747 Gene3D Ribonuclease Inhibitor 31 178 IPR032675 -
Glsi07g0623 747 ProSitePatterns Protein kinases ATP-binding region signature. 440 463 IPR017441 GO:0005524
Glsi07g0623 747 MobiDBLite consensus disorder prediction 319 339 - -
Glsi07g0623 747 Pfam Protein tyrosine and serine/threonine kinase 436 706 IPR001245 GO:0004672|GO:0006468
Glsi07g0623 747 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0623 Glsi-ChrGlsi07 5481414 5489541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0623 8 746 Strubbelig Receptor Gene Family AT1G53730 64.257 0.0 885
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Glsi07g0623 PK_Tyr_Ser-Thr 3.2e-41 CL0016