Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0613 ATGAGCAAGATAAAACAAGTCTTCGCCGGAATCACAGATTCCGGCAACCCCAAACTCATTTCCATGTCGCCCAAGAAGAACAAAAAACTCTTCTTAACTCTCTTTGCCTCTCTCTTTCTCCTCGCCGCCATCATTTGCATTGTCGCCGGAGTAAGCTCCCGCAACAAAAGCTCCGGCGCCGACGACAATGTCGGGTCTACCCCATCCCACGCCGTCATCAAATCCGCTTGTAGTAACACATTGTACCCTGAACTCTGTTTCTCAGCCATTTCCTCCGAACCCGGAATTACCCAACAAGTTTCCACCCACAAAGACGTCATAGAACTGTCGTTGAATATAACCACCAGAGCCGTCGAACATAACCAATTCACAGTCCAGAAGCTTACGACTAGAACGGGCTTAACTGAGCGTGAAAAAACCGCTCTCCACGATTGCTTGGAGACCATCGATGACACTCTCGACGAGCTTCGCACCGCCATGGACGATCTCAGAGAGTATCCGAATAAAAAATCTCTTTCACAGCACGCCGATGACCTCAAGACTCTGATCAGCGGCGCCATAACCAACCAAGTGACGTGCTTGGACGGGTTTTATCTCGACAAGCACATGAGGGAAGCTATAAAAGGAGGGCAAGTTCATGTGGAGCAAATGTGTAGTAATTCGTTGGCTATGATCAAGAACTTGACGGACACAGACATAGCCAATTACGAGAAGAACATGGGGGCGAAGAGTAGGAAGCTGATGGGGGCAGAGGAGGGTGGGATTGAGTGGCCGGAGTGGGTTTCAGCGGCGGACAGGCGTCTGTTGCAGGCGACGACGGCGAAGCCGGACGTGGTGGTGGCGGCTGACGGGAGCGGAGATTTCAAGACGGTGTCGGAGGCGGTGGCGGCTGCTCCTCAGAAGAGTAGCAAGAGATACATAATTAAGATCAAAGCGGGGGTTTATAGAGAAAATGTGGAAGTGCCCAAGAAGAAGACCAATATTATGTTCTTGGGTGACGGAAGAAAGAACACTATCATCACGGGTAGCAGAAATTTCGTCGATGGTAGCACGACTTTCCATTCTGCCACAGTTGCTGTAGCGGGAGAGCGATTCCTGGCCCGGGACATGACCTTCCAAAACACAGCGGGTCCCTCGAAGCACCAAGCCGTGGCCCTGCGAGTCGGGTCGGACCTCGCGGCCTTCTTCAACTGCGACTTTCTAGCATACCAAGACACCCTCTACGTCCACCACAACCGCCAATTCTTCGTAAACTGCCTCATCGCGGGCACCGTAGATTTCATCTTTGGCAACGCCGCCGCCGTCTTCCAAGACTGCGACATCCACGCCCGGCGCCCCAACTCGGGCCAGAAGAACATGGTCACAGCACAGGGTCGGGTCGACCCGAACCAAAACACCGGGATCGTGATCCAGAAGTGCAGAATCGGAGCCACCGGTGATCTGGAAGCGGTGAAGAAAGACTTCCCGACGTACCTCGGGCGGCCGTGGAAGGAGTACTCGAGGACGGTGATCATGCAGACGATTATAAGCGATGTGATTGAGCCAGTGGGGTGGCACGAGTGGAATGGGGATTTTGCTTTGAGCACTTTGGTGTATAGAGAGTATCAGAATACGGGGCCTGGTGCCGGAACTTCTGGGAGGGTGAATTGGAAGGGTTATAAGGTGATTACCAGTGCTTCGGAGGCTCAGGAATTTGCTCCTGGAAGCTTCATTGCCGGGTCTAGCTGGTTGGGGTCCACTGGGTTTCCGTTCTCTCTTGGTCTGTAA 1767 0.5303 MSKIKQVFAGITDSGNPKLISMSPKKNKKLFLTLFASLFLLAAIICIVAGVSSRNKSSGADDNVGSTPSHAVIKSACSNTLYPELCFSAISSEPGITQQVSTHKDVIELSLNITTRAVEHNQFTVQKLTTRTGLTEREKTALHDCLETIDDTLDELRTAMDDLREYPNKKSLSQHADDLKTLISGAITNQVTCLDGFYLDKHMREAIKGGQVHVEQMCSNSLAMIKNLTDTDIANYEKNMGAKSRKLMGAEEGGIEWPEWVSAADRRLLQATTAKPDVVVAADGSGDFKTVSEAVAAAPQKSSKRYIIKIKAGVYRENVEVPKKKTNIMFLGDGRKNTIITGSRNFVDGSTTFHSATVAVAGERFLARDMTFQNTAGPSKHQAVALRVGSDLAAFFNCDFLAYQDTLYVHHNRQFFVNCLIAGTVDFIFGNAAAVFQDCDIHARRPNSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATGDLEAVKKDFPTYLGRPWKEYSRTVIMQTIISDVIEPVGWHEWNGDFALSTLVYREYQNTGPGAGTSGRVNWKGYKVITSASEAQEFAPGSFIAGSSWLGSTGFPFSLGL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0613 588 Gene3D - 271 588 IPR012334 -
Glsi07g0613 588 SMART PMEI_2 68 224 IPR006501 GO:0004857
Glsi07g0613 588 Pfam Plant invertase/pectin methylesterase inhibitor 72 224 IPR006501 GO:0004857
Glsi07g0613 588 ProSitePatterns Pectinesterase signature 2. 421 430 IPR033131 -
Glsi07g0613 588 FunFam Pectinesterase 69 229 - -
Glsi07g0613 588 PANTHER PECTINESTERASE 43 578 - -
Glsi07g0613 588 NCBIfam pectinesterase inhibitor domain 58 229 IPR006501 GO:0004857
Glsi07g0613 588 Pfam Pectinesterase 277 573 IPR000070 GO:0030599|GO:0042545
Glsi07g0613 588 SUPERFAMILY Pectin lyase-like 272 587 IPR011050 -
Glsi07g0613 588 FunFam Pectinesterase 271 588 - -
Glsi07g0613 588 CDD PMEI-like_3 75 229 - -
Glsi07g0613 588 Coils Coil 146 166 - -
Glsi07g0613 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 69 230 IPR035513 -
Glsi07g0613 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 72 229 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0613 Glsi-ChrGlsi07 5415085 5419157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0613 25 588 Carbohydrate Esterase AT3G14310 67.863 0.0 779