Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0606 ATGGCAAAAGTTTATCCCTTTCTTTCCTCCACTACTGCTTGCTACTTCACTTCCAAACAAGAAACTTTCACCATATGGATGAAATCTCTGATACTCAATGGAAAAGGCTGCACTGTCTTTGATTCCAAAGGCCAAATTGTGTATCGGCTTGATAACTATAACAGCAGGTGTGTTGATGAAGCTTTTCTCATGGATCCAAAAGGCAATGTCTTGTTTACCATACTGAGAAAGAAATCAAGGTTATCCAGGGCTTGGGAGGGCTACAGATCATCCACTGCCACAGATAATGACCCAAAAGAACCAAGCTTTCGGGTTCGAAAAGCTGGCTGGATTTATAGAGGGGATTTATCATATGAAGTTATCCTTGGACTGGATAAGAATCAGCCATATTCTCATAAAATAGAAAGCAGCACTTGTAGTTCAGCTTGTAAAATATCTGATCAGTTTGGAGGGCTTGTTGCAGAGTTAAGGAGAAAGAAGTCAAGTTGTGGAGTTGATTTGGGAGATGACGTTTTGACAATGGTAGTGGAGCCAAATATAGATCTCTCTCTAATCATGGGGCTTGTTGTAGCTTACAGCCTCATGCACTGTAAAATGTTGCGAGTTTTTCTTCGGGTGGTCTTTAGAAACCACTTCCTTTTAGGTGCCAAAGCAATACAAGATCCAGAATTAATGGAGAAGCTTTATTCTTCAGCATCGTTCATCCTCGATAGGCAACAAAAGGACGCCGCTTTGAAACCCGACACCTTCTCCATCTCTCCTGCTCAGGGTACTACTCAATCTTCAATGGCTGACACCAGTCAGAACCCCAGTCCTAAGATTTCCGCTTATATCAAACCAGGGCGGCACATCATGGCGTCATCACCAGCGACTGGCTTGCCCAAGCTCAGGCTGCTACCGTCCTGGGATACAACCTCTATCTCTTTGACAGCAGGATGTGATCTGTTTATGCAATTTGTAACTAGGACTTCTGCTTTAGAGTATGGAAACTTTAATTTGGCAAAGTCTCGCTTAATTGAACGTGCTGAAAAGTTTGGGGAAATCTCATACAAGGCTCTAAAAACTATTGCAATGCTGAGTCAAGATTTTATATTTGATGGTTGTACAATTTTGGTACATGGTTTTTCCAGAGTTGTCTTTGAAGTTCTGAAACTGGCAGCACAAAATAAGAAGTGCTTTCGGGTCTTCTGCACAGAGGGAAGACCGGAACGAACCGGTTTACGGTTGTCCAATGAGCTGGCCAAGCTTGATGTTCCTGTAAAAGTCCTGATAGACTCTGCAGTCGCATATACTATGGATGAGGTGGACATGGTATTTGTGGGGGCAGATGGAGTTGTTGAAAGTGGAGGTATAATTAACATGATGGGGACATAA 1374 0.4265 MAKVYPFLSSTTACYFTSKQETFTIWMKSLILNGKGCTVFDSKGQIVYRLDNYNSRCVDEAFLMDPKGNVLFTILRKKSRLSRAWEGYRSSTATDNDPKEPSFRVRKAGWIYRGDLSYEVILGLDKNQPYSHKIESSTCSSACKISDQFGGLVAELRRKKSSCGVDLGDDVLTMVVEPNIDLSLIMGLVVAYSLMHCKMLRVFLRVVFRNHFLLGAKAIQDPELMEKLYSSASFILDRQQKDAALKPDTFSISPAQGTTQSSMADTSQNPSPKISAYIKPGRHIMASSPATGLPKLRLLPSWDTTSISLTAGCDLFMQFVTRTSALEYGNFNLAKSRLIERAEKFGEISYKALKTIAMLSQDFIFDGCTILVHGFSRVVFEVLKLAAQNKKCFRVFCTEGRPERTGLRLSNELAKLDVPVKVLIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGT 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0606 457 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 298 457 - -
Glsi07g0606 457 Gene3D - 12 199 IPR038595 -
Glsi07g0606 457 Pfam Initiation factor 2 subunit family 297 457 IPR000649 GO:0044237
Glsi07g0606 457 Pfam LURP-one-related 13 190 IPR007612 -
Glsi07g0606 457 SUPERFAMILY Tubby C-terminal domain-like 15 197 IPR025659 -
Glsi07g0606 457 SUPERFAMILY NagB/RpiA/CoA transferase-like 297 457 IPR037171 -
Glsi07g0606 457 Gene3D - 352 457 IPR042529 -
Glsi07g0606 457 Gene3D - 255 348 IPR042528 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0606 Glsi-ChrGlsi07 5356794 5363364 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0606 299 457 Eukaryotic Initiation Factors Gene Family AT1G53880 83.648 1.63e-91 281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0606 07 5356794 5363364 Glsi07g0606 07 5356794 5363364 ECH