Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0579 ATGGCCAATGGAGGAGAGAAAGGCAATGACTTCTATGCGGTTCTGGGGTTGAATAAGGATTGCACGCAATCAGAGCTCAGAAATGCCTATAAGAAACTTGCACTGAAATGGCACCCAGATCGTTGTTCAGCGTCAGGGAATTCAAAGTTCGTAGAAGAAGCAAAGAAGAAGTTCCAGGCAGTCCAGCAAGCCTATTCTGTTTTATCTGACGCGAACAAAAGGTTTCTGTACGACGTAGGAGTCTATGACAGCGATGACGACGAAAACGGCATGGGTGAGTTCTTGAACGAAATGGCAGCAATGATGAGCCAAACAGAACCAAACGAAAATGGGGAGGAGAGCTTTGAGGAGTTGCAACAGCTGTTTGAAAATATGTTTGAAGGGGATATTGTATCAGCTGAAAGTGGCTATGCTGCTGGTTGTTCTGCTTCATCTACGTACATGACTTACACTGGAACTTCTACTACTTCCAACAATATTGGGAAGGCTGAGGAATCCTTTGATTTCAATGCCACCTACCAGAATTTCTGTCTAGGGATGGAGCAACTCCAAGATATGAAGGGAAAGAGAGAAGGAGGAGGCAGCAGAAGTAGGCACGGTAGAAAGCAAAAAAATTCAGCTTGCTCCAATGGCTTATGCTGA 642 0.4486 MANGGEKGNDFYAVLGLNKDCTQSELRNAYKKLALKWHPDRCSASGNSKFVEEAKKKFQAVQQAYSVLSDANKRFLYDVGVYDSDDDENGMGEFLNEMAAMMSQTEPNENGEESFEELQQLFENMFEGDIVSAESGYAAGCSASSTYMTYTGTSTTSNNIGKAEESFDFNATYQNFCLGMEQLQDMKGKREGGGSRSRHGRKQKNSACSNGLC 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0579 213 CDD DnaJ 10 70 IPR001623 -
Glsi07g0579 213 PRINTS DnaJ domain signature 30 45 IPR001623 -
Glsi07g0579 213 PRINTS DnaJ domain signature 12 30 IPR001623 -
Glsi07g0579 213 PRINTS DnaJ domain signature 53 73 IPR001623 -
Glsi07g0579 213 SMART dnaj_3 9 73 IPR001623 -
Glsi07g0579 213 SUPERFAMILY Chaperone J-domain 8 80 IPR036869 -
Glsi07g0579 213 Pfam DnaJ domain 10 78 IPR001623 -
Glsi07g0579 213 Gene3D DnaJ domain 7 137 IPR036869 -
Glsi07g0579 213 ProSiteProfiles dnaJ domain profile. 10 81 IPR001623 -
Glsi07g0579 213 PANTHER PUTATIVE, EXPRESSED-RELATED 2 166 - -
Glsi07g0579 213 MobiDBLite consensus disorder prediction 187 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0579 Glsi-ChrGlsi07 5106433 5109990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0579 12 78 C2H2 Transcription Factor Family AT1G74250 44.118 9.91e-11 58.9