Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0575 ATGGACGACGACGACAAGATCCAGTCACATCCGTCGCCGGTGAGTGGATCTCCGGGTTCGCCGAGGTCGAACGGTCGGATAACGGTAACAGTTGCGGCGCCGGCGCCGGTGCCACCGCAGAGCAGTTTGACAGTAGCACTTCCAATTCAGCAGCCGAAGGGTAATGGTGGTGGAGGGAGGGAGGATTGCTGGAGTGAAGGAGCGACGGCGGTGTTGATCGATGCGTGGGGGGAGAGGTATTTGGAGCTGAGTAGGGGGAATCTGAAGCAGAAGCACTGGAAGGAGGTGGCTGATATTGTGAGCATTAGGGAAGACTATAGGAAAACGCCCAAGACTGATATTCAGTGCAAGAATCGGATCGATACAGTGAAGAAGAAGTACAAATTGGAGAAGGCGAAGATTGCAGCTGGCGGTGGGCTTAGTACATGGCCATTCTTTGAGAGGCTGGACCAGTTGATTGGTCCAACTGCGAAAATTGCTGGGTCCAGTGGTGGTGCCGGGACTAGTGCGGGGAATAACAATTTGCTAACCCAGAAAGTGCCGTTGGGAATTCCGGTAGGAATTCGGGGAGTGAATCAGTATCAAGCTCATCAACGGCCAAAGCAGCAGCCACAGTTGAAGACCCAGAAGATACAGTTGCGGAGGCGAGCTCCAGTAGACTCAGATTCGTCACGGTCGGAGAGAGAATCCTCGCCGGTTTCGAGCGATAGTTTTCCACCTGAAACGTATGAGAGGAAGAGATCCAGGGTGCCAAGGGAGATCAATTCTGATGCTGGACCTAGACGTGCGGGTACTGTGGAAGGGAAGGAAGAAGAAGGAAGGGATAAGGGTTGGGGGAGTGCAGTGAGGGAATTGACTCAGGCGATACTGAAATTTGGTGAAGCCTATGAGCAGGCAGAGAGCTCAAAGCTGCAGCAGGTGGTGGAAATGGAAAAGCAGCGAATGAATTTTGCTAAGGAGATGGAATTGCAGAGAACGCAGTTTTTCATGAAGACCCAGTTGGAGATTTCGCAGCAGAAGCACCATGGGAGGAGAGGTGGCAACGCCAGCAACCATCATAGCAAAAACAATAACAACAATAGTGACAGTGATAATAAGATGGTTAGATTGGACTAG 1116 0.5179 MDDDDKIQSHPSPVSGSPGSPRSNGRITVTVAAPAPVPPQSSLTVALPIQQPKGNGGGGREDCWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVADIVSIREDYRKTPKTDIQCKNRIDTVKKKYKLEKAKIAAGGGLSTWPFFERLDQLIGPTAKIAGSSGGAGTSAGNNNLLTQKVPLGIPVGIRGVNQYQAHQRPKQQPQLKTQKIQLRRRAPVDSDSSRSERESSPVSSDSFPPETYERKRSRVPREINSDAGPRRAGTVEGKEEEGRDKGWGSAVRELTQAILKFGEAYEQAESSKLQQVVEMEKQRMNFAKEMELQRTQFFMKTQLEISQQKHHGRRGGNASNHHSKNNNNNSDSDNKMVRLD 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0575 371 MobiDBLite consensus disorder prediction 10 27 - -
Glsi07g0575 371 MobiDBLite consensus disorder prediction 195 281 - -
Glsi07g0575 371 MobiDBLite consensus disorder prediction 332 371 - -
Glsi07g0575 371 MobiDBLite consensus disorder prediction 213 229 - -
Glsi07g0575 371 MobiDBLite consensus disorder prediction 350 365 - -
Glsi07g0575 371 MobiDBLite consensus disorder prediction 195 210 - -
Glsi07g0575 371 FunFam trihelix transcription factor ASIL2 64 129 - -
Glsi07g0575 371 MobiDBLite consensus disorder prediction 240 256 - -
Glsi07g0575 371 Pfam Myb/SANT-like DNA-binding domain 61 152 IPR044822 -
Glsi07g0575 371 MobiDBLite consensus disorder prediction 263 279 - -
Glsi07g0575 371 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 35 345 IPR044823 -
Glsi07g0575 371 MobiDBLite consensus disorder prediction 1 28 - -
Glsi07g0575 371 Gene3D - 64 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0575 Glsi-ChrGlsi07 5094610 5095725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0575 1 355 Trihelix Transcription Factor Family AT3G14180 46.637 2.63e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi07g0575 Myb_DNA-bind_4 1.8e-25 CL0123