Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0562 ATGTCGACTTTCCCTGATACGGTGGCGGATTGCCGGAGGCTCGGCAGGGCGCCGGACAAATCCAATTTCACTCAGACTTGCAACCTCTTAAGCCTGTTCTTGAAGGAGAAGCGGAGTTCTGGCGCTTTGAGCCTTGGAAAGGCCGGGAAAATGGAACCCAGAGCAACTACGATGGACTTGCTAACGAACCTGGAGAGTTCGGACGATACTTCGAGACAAAATGCTTCTGCCCTGGATTTTGTTCCCCAGTTTTTGGAGAACCCCTGCATTAAACAGTCTGATTTCAGATCACCGGCCAGATCAGATCCTAAAACTCCCCAAATGGCAATATTTTACGCCGGAAAAGTGTTAGTATTTGATGCTTTTCCGCCTGAGAAGGCGACGGAGATACTGGAGCTGGCTACCAAGCTAAGCTCTAATAATTCTGGCTTTAGCAGAAACCCTCTCACTGTTCCTGAAAATTTGAACGCGGTCAAAGTGCCTCAAACAAACACTCCCAGAGAAGGCCCTCGACCGGGATCCGAAGCTTTTGGTTCAGATATGAAATACCCCAGGAGAGCTTCACTTCTAAAATTCCTGGAGAAAAGAAAAGAAAGGGTGCTTGCAAGAGGACCTTACCAGATGAACCCCAAGAATGAGGGAGGCAGTTCTGGAGGCAACCCTGAAGATCAGTTTTGCCAGCCCTTTGATCTTAACTTATAA 702 0.4829 MSTFPDTVADCRRLGRAPDKSNFTQTCNLLSLFLKEKRSSGALSLGKAGKMEPRATTMDLLTNLESSDDTSRQNASALDFVPQFLENPCIKQSDFRSPARSDPKTPQMAIFYAGKVLVFDAFPPEKATEILELATKLSSNNSGFSRNPLTVPENLNAVKVPQTNTPREGPRPGSEAFGSDMKYPRRASLLKFLEKRKERVLARGPYQMNPKNEGGSSGGNPEDQFCQPFDLNL 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0562 233 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 18 211 IPR040390 -
Glsi07g0562 233 MobiDBLite consensus disorder prediction 144 180 - -
Glsi07g0562 233 MobiDBLite consensus disorder prediction 144 169 - -
Glsi07g0562 233 ProSiteProfiles Tify domain profile. 101 136 IPR010399 -
Glsi07g0562 233 Pfam tify domain 103 134 IPR010399 -
Glsi07g0562 233 SMART tify_2 101 136 IPR010399 -
Glsi07g0562 233 Pfam Jas motif 185 207 IPR018467 -
Glsi07g0562 233 MobiDBLite consensus disorder prediction 201 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0562 Glsi-ChrGlsi07 4991118 4993104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0562 20 217 Tify Gene Family AT1G19180 32.314 1.53e-23 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Glsi07g0562 tify 6.2e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0562 07 4991118 4993104 Glsi07g0562 07 4991118 4993104 ECH