Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0559 ATGGAGCCGCCGGAGAATGCTGGGTTAGCATTTCAAACGGCGGAGAAGATTATCCTCAGGTGGGACTCTACAGCGTCCGAGGAAGCCAGGGAAAAGATGATATTCGAAGGTGACCGCCAAGAGGTCGATCGCTATTTGCAGGCCGTCGATGAAATCCAGCGCTCCATGTCTTCCGCTTCGATCTCTGATGACCCAAACAAAGTCAACTCAGCTATTCAGATCGCCATGGCTCGTTTGGAAGATGAATTTCGTAACATCCTTATTTCTCACACTAATCCCATTGAGACCGATTCGTTAACAGATCCCAGCTCATCAATTCACTCTAGTTTTTCAACCACTGGGGGAGCTGAGCTAGACGATGAAACTATTGCTGAAGAAGAAGAGGATGATTCGGTGAGCAAAGGCGATGAGCTTCTTCGCTTCAACAGTGGGGCTTCCAGCGCTAATTCTAGCTACCGATCAACCAGTAGTATTCGCGAGATCGATCTGATACCCTCTGATGCCATTTATGACCTCCGGAGCATTGCTGAGCGGATGATCTCATCTGGGTATTTGCGTGAGTGCATCCAGGTTTATGGTAGTGTGAGAAAATCTGCAGTTGATGCTAGTTTCCGGAGACTCGGGATCGAAAAGTTGAGTATCGGTGATATTCAGAGGCTAGAGTGGGACAGGCTTGAGGCTAAGATCAGACGGTGGATAAGGGCTGCTAAGGTTTGTATCAGGACATTGTTCGCAAGTGAGAAGAAGCTCTGTGAGGAAATCTTTGATGGGATTGGGACTGCTATTGATGATGCCTGCTTTATGGAGACAGTCAAAGGTCCAGCAATTCAGCTCTTCAATTTCGCTGAAGCCATTAGCATAAGCCGGAGATCCCCTGAGAAGCTGTTCAAAATATTGGACCTTCATGATGCTTTGATGGATTTGATACCTGATATTGATATTGTATTTGACTCCAAGTCCTCCGAGTCCATTCGAATTCAGGCTGCTGAGATACTGTCTCGGTTGGCAGAGGCAGCAAGAGGGATATTGTCTGAGTTTGAGAATGCTGTGCTTCGTGAACCATCCAAGGTTCCAGTACCAGGTGGGACAATTCATCCTTTGACGAGGTATGTGATGAATTACATAAGTTTGATCTCTGATTATAGGCAGACGTTGAATGAGCTTATAGTGTCTAAACCATCGACGGGATCCAGATATTCGGGTGATCCTTCAACCCCAGATATGGATTTTGCTGAATTAGAGGGGAAAAATCCATTGGCTATTCACTTGATTTGGGTAATTGTGATATTGCAGTTTAATTTGGAAGGTAAGTCCAAGCATTATAAGGATGCATCATTGCCTCACCTGTTTATGATGAACAATGTTCACTACATTGTTCAGAAGGTAAAAGGGTCACCTGAATTGAGGGAATTGATTGGAGATGATTATTTGAAGAAGATGACTGGGAAATTCCGTCAGGCAGCTACTAGCTACCAGAGAGCGACTTGGGTGAGGGTGTTGTATTGTTTGAGGGACGAGGGATTACATGTAAGTGGAGGATTTTCTTCTGGGGTCTCAAAAAGTGCTTTGAGAGAGAGGTTTAAGGCCTTCAATGCTATGTTTGAGGAGGTACATAGGACTCAGGCAACTTGGTTGGTACCAGATTCTCAACTCAGGGAGGAGCTTCGCATATCTATATCAGAGAAACTGATCCCGGCATATAGGTCATTTCTTGGGCGGTTCAGGAGTCATATAGAGAGTGGAAGGCATCCAGAGAACTACATTAAGTATTCAGTTGAGGACCTGGAGACTGCTGTTTTGGATTTTTTTGAAGGATACCCAGTTTCCCAGCACTTAAGGAGGAGATCTCAATGA 1854 0.4525 MEPPENAGLAFQTAEKIILRWDSTASEEAREKMIFEGDRQEVDRYLQAVDEIQRSMSSASISDDPNKVNSAIQIAMARLEDEFRNILISHTNPIETDSLTDPSSSIHSSFSTTGGAELDDETIAEEEEDDSVSKGDELLRFNSGASSANSSYRSTSSIREIDLIPSDAIYDLRSIAERMISSGYLRECIQVYGSVRKSAVDASFRRLGIEKLSIGDIQRLEWDRLEAKIRRWIRAAKVCIRTLFASEKKLCEEIFDGIGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALMDLIPDIDIVFDSKSSESIRIQAAEILSRLAEAARGILSEFENAVLREPSKVPVPGGTIHPLTRYVMNYISLISDYRQTLNELIVSKPSTGSRYSGDPSTPDMDFAELEGKNPLAIHLIWVIVILQFNLEGKSKHYKDASLPHLFMMNNVHYIVQKVKGSPELRELIGDDYLKKMTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNAMFEEVHRTQATWLVPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLETAVLDFFEGYPVSQHLRRRSQ 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0559 617 MobiDBLite consensus disorder prediction 93 117 - -
Glsi07g0559 617 Pfam Exo70 exocyst complex subunit 231 599 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi07g0559 617 Gene3D Exocyst complex component Exo70 130 613 - -
Glsi07g0559 617 Gene3D Exocyst complex component Exo70 17 126 - -
Glsi07g0559 617 MobiDBLite consensus disorder prediction 93 116 - -
Glsi07g0559 617 PANTHER EXOCYST COMPLEX PROTEIN EXO70 10 605 IPR004140 GO:0000145|GO:0006887
Glsi07g0559 617 SUPERFAMILY Cullin repeat-like 28 604 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0559 Glsi-ChrGlsi07 4962668 4964521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0559 5 617 EXO70 exocyst subunit family AT1G72470 70.813 0.0 865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0559 07 4962668 4964521 Glsi07g0559 07 4962668 4964521 ECH