Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0539 ATGCTCAATGGTTCAGTTCCAGACACGTTCCTTCGCCTTTACCATGAAGAAGAGATCGATTTCACTGTACCTGAGGTTATCATTGTAGCATCCGTTGCATTGTTTTTTACTGCAATCCTCGATTTATCTATCGTTTGGCGCGCAGATACAGTTAAGAGGATCAAGAAAGAAGTAGGATCATTAAAAAATCTGCAAAAGGATTATGATCAACTTTTAAAGCAAGGGTATGAGGTGGAATTGCGAGCGCGCAGCTTCTGGCATTCAGAACTCAATTCAGCTGGAATTCGCCCGCAGCTAAGTGAAGCTCAAAAACAATGGGTGGAATCAATAAGTGAAGTTGTTCGTGAGGCAGATGAATGTGTCGCGAACTACAATAAACAAACCCGCGGATTCCTTTATGGTTATACAGCTCTCTTTAGACTTATGCCCATTATTGAGGTTCACGGTCAAATAGGCAAAGTCATGCAAGCAATAGACAACCTTTTTGATATGAAGAAAAAAGATGCGGCGAAAATCTATCGATCCATGGACGAGTCTAGATCCAAGTACAGAATGCTATTGGACCGAAATACCATTCAAGAGAACAAAAAGTCCGTACCAGCTCATCCGCCACGGTCAAGCCCAGACTGGATGATGGAGGCTAAAGACTTATTCTCTGGAATGGAAGAGAGGCAGTCTATCTATCTGCTGTTTCCACTGCAGGCTTTTCTCAATGATTTGCACCAGCTTCAATTAGAAACTGAAACAGAGAAGTCCTGGAAGGCAGAATTAGAGAAGTTGATTGCAGATGCAGAGTTCTTCATCAAAAAGTTCTTATGGTGGGTTTCACTTTTTAGCAAGATAGGGATATCAAGTAATATCAATCCAGTAGCCACGTTCAAATTCAGAAGGCATATGAAGCACATTCTCGCCGTGTTTGATGAGCTGCTCGAAAGAAAGCAAAGATATGGTTTTGATTTTATTGACAGAACAGCCAAAAACTTAATTTTCCCTTCAGCCGTGGAAGACAAACCCGGCGACGTGGAACAAAATTCAAATCAAGAGGCTGTAATCAGCTCACTGTTGAATGAAATGAAAAATAAGCTACAGGAAAGAGAAGAAACAGCTGGAAGAAATAATTGCTTGAAGCAAATAGAGCGCTTGTCTAAGGAGATATACAGAATTTCACTCAATTCCAGTAGTGTCCATTTTAAGCAAATAAAAATTGCTGTCGGGCGTCTTAAGAAAATCATAGATGTATGCACCATTGCGAGAGGGAAGCCAACCTCAGTAGTTGGTTTGAAAAGTGACATACGAAATCTAGTCTCAAAGCTCACTGCTACTGGTGATGATCAGTCTATAATTTCCATTGTGGGGATGGCAGGCATAGGAAAGACAACTTTGGCAGATGAGATTTATCACAAGAAGACTGTTGCCAATCGTTTTCCTGTCCGCGCCTGGGTGCAGGTATCCCGGAAGGTTTATGAAACACAGGTCTTTCTTATGAGAGAGGATGGAACTGGAGAGCAGCTGTGCATCAAACAAGTTGGTGATCGCTTGAAAGCGAATCCTTGCCTTGTTGTCATAGATGATGTCTCAAGTAAGGAAGAATGGGATGAACTAAAACGACTTTTATTTGGATTTAGAAGGGGAAAAAGAAACAGAATACTGCTCACAACGCGCTCTAATGATGTGGCTTTGCATGCTGATAGAAATAATACTCTGCACCAACTTAGACTACGAACCAAAGGAGAGAGTTGGGACTTGTTCAAGATGGTGATCTCAATTACAACATTAAAAGAAGATGTGGAAAATCTTGCAAGTAAGGCCATGGGAAGATGCGGGGGACTACCACTTGCAATCTTATCCCTTGGTTGTCTAATGCTAGCAAATGGTGTGGAAAAGGAAGTGTTATCGGTGGCACTGGATGAAATGAATCAAGGTCAGAACCAAACACCATGGCGAGAGGTGTGGTTAAAGTATTCCAAATATCTCACTGGAACTCAGAGGAACTGCCTTTATTGCTTCACACTCTTCCCTATTGACTATGAGATCCCTGCAAGGAGATTAGTCACTCTATGGGTTGCAGAAGAATTGGTTGAACACCATGAGGGGTTGGCGCCTGAAGACGTTGCAGAAAGGCATTTAGAAATGTTACGACGCTGCTACATGATTCAAGCAGTCCAGCTAAAGTCCGATGGGAATATTAAGACATGTCGCTTGCCTAGTATGCTGAGAGAATTCATCGTCCGAGATGGTACCCGAACAAGCCGAGGTCAGTACCATAATATAAATTTACAGCGGCGATTTTCTTATCATGTAGATGATAGTCTTGACCCAAATTTAGCAAGTGTCTTCAGCAAGAAAGAAATTCCCCTATCCGTTCTTTTCTTTGACAAGCGAGAGGGGAATAGACCAGGAGAACACACAGGGAACATCCTTTCTATAGGAATTGCAAGCAGACAGTTCATGGAGATCAGAGTTCTTGATCTTGAACGTGTATTCAGACCTCAGTTACCAGAGGCAGTAAGCAAATTAATTTGTCTGAAGTACCTGGGCTTAAGGTGGACTTACTTAGAGGCAATTCCACCATTCATAGGCAAATTGCTGAACCTTGAAACACTGGATGTAAAGCATACCTATATCAGTATCCTCCCTAGCTCCATCTGGAGATTGAAGAAACTGAAGAACTTATATTTGAACCAAAGTTATCGAAGTAAACTTGAGGGAAAACTAAGTGGTAACTCCCAGGAAAGTCTTCAGATGCTATGGGGAGTATTCATAGATGGAAGGAGCCCTCTTCTTCATGAACTGCACAGGCTGAAGATCCTCAGAAAATTAAAAATGGCTTTCCAGCTGGAAGAAACAGAGCAAGAGGTACTGGCTAGTCAGATTGTGAAGCTGAACCAGCTTCAATCACTGAGGCTTAGATCAACAGACGAAATGGGTAAACCACAACAATTAATATTGCATGATATGTCAGAGCTGATGCAGCTTTCATCCCTTCATTTGTTTGGGAATTTAAGAGATCAACTACGCACAAGCCAACTGCCTCAAAGTCTCACCGATCTTACCTTGTCGGCTTCAAAAATTTCACTTGATCCTCTGCAAGAGTTGAAGAATCTGCAAAAGCTTAAGTCATTGTGTTTAAGAGCTGAATCTTATATTGGGAAAGAGATGGTTTGCAGCGGAGACAGCTTTAAAGAGCTTCAAGTTTTGAGATTCTGGAAGTTAGAGGACCTGGAGAAATGGAAAGTAGAGGATGGGGCAATGCCAAACCTTATGGAGTTAGAAATCAGGTCCTGCAAGCAATTGGAATTTCCGAATGGCCTGAAGCATTTAAAAACTCTACACAAGATAAAGTTACCAGATATGCCACATGAATTCATAAAGGATGTTCAACAAAATGAAAAGGCGTTTTGGGACGACATTGAGATTGTCTACTCGCTCTAG 3432 0.4175 MLNGSVPDTFLRLYHEEEIDFTVPEVIIVASVALFFTAILDLSIVWRADTVKRIKKEVGSLKNLQKDYDQLLKQGYEVELRARSFWHSELNSAGIRPQLSEAQKQWVESISEVVREADECVANYNKQTRGFLYGYTALFRLMPIIEVHGQIGKVMQAIDNLFDMKKKDAAKIYRSMDESRSKYRMLLDRNTIQENKKSVPAHPPRSSPDWMMEAKDLFSGMEERQSIYLLFPLQAFLNDLHQLQLETETEKSWKAELEKLIADAEFFIKKFLWWVSLFSKIGISSNINPVATFKFRRHMKHILAVFDELLERKQRYGFDFIDRTAKNLIFPSAVEDKPGDVEQNSNQEAVISSLLNEMKNKLQEREETAGRNNCLKQIERLSKEIYRISLNSSSVHFKQIKIAVGRLKKIIDVCTIARGKPTSVVGLKSDIRNLVSKLTATGDDQSIISIVGMAGIGKTTLADEIYHKKTVANRFPVRAWVQVSRKVYETQVFLMREDGTGEQLCIKQVGDRLKANPCLVVIDDVSSKEEWDELKRLLFGFRRGKRNRILLTTRSNDVALHADRNNTLHQLRLRTKGESWDLFKMVISITTLKEDVENLASKAMGRCGGLPLAILSLGCLMLANGVEKEVLSVALDEMNQGQNQTPWREVWLKYSKYLTGTQRNCLYCFTLFPIDYEIPARRLVTLWVAEELVEHHEGLAPEDVAERHLEMLRRCYMIQAVQLKSDGNIKTCRLPSMLREFIVRDGTRTSRGQYHNINLQRRFSYHVDDSLDPNLASVFSKKEIPLSVLFFDKREGNRPGEHTGNILSIGIASRQFMEIRVLDLERVFRPQLPEAVSKLICLKYLGLRWTYLEAIPPFIGKLLNLETLDVKHTYISILPSSIWRLKKLKNLYLNQSYRSKLEGKLSGNSQESLQMLWGVFIDGRSPLLHELHRLKILRKLKMAFQLEETEQEVLASQIVKLNQLQSLRLRSTDEMGKPQQLILHDMSELMQLSSLHLFGNLRDQLRTSQLPQSLTDLTLSASKISLDPLQELKNLQKLKSLCLRAESYIGKEMVCSGDSFKELQVLRFWKLEDLEKWKVEDGAMPNLMELEIRSCKQLEFPNGLKHLKTLHKIKLPDMPHEFIKDVQQNEKAFWDDIEIVYSL 1143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0539 1143 Gene3D - 656 745 IPR036388 -
Glsi07g0539 1143 Gene3D - 410 569 IPR027417 -
Glsi07g0539 1143 Gene3D Ribonuclease Inhibitor 800 1136 IPR032675 -
Glsi07g0539 1143 Gene3D - 575 655 IPR042197 -
Glsi07g0539 1143 PRINTS Disease resistance protein signature 512 526 - -
Glsi07g0539 1143 PRINTS Disease resistance protein signature 607 621 - -
Glsi07g0539 1143 PRINTS Disease resistance protein signature 447 462 - -
Glsi07g0539 1143 PRINTS Disease resistance protein signature 1082 1098 - -
Glsi07g0539 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 420 667 IPR027417 -
Glsi07g0539 1143 PANTHER DISEASE RESISTANCE PROTEIN RP 245 1097 IPR044974 GO:0006952
Glsi07g0539 1143 Pfam NB-ARC domain 429 631 IPR002182 GO:0043531
Glsi07g0539 1143 Coils Coil 344 364 - -
Glsi07g0539 1143 SUPERFAMILY L domain-like 809 1122 - -
Glsi07g0539 1143 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0539 Glsi-ChrGlsi07 4768862 4772293 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0539 425 614 WRKY Transcription Factor Family AT5G45050 24.378 2.82e-07 53.1