Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0534 ATGATTAGTCCAAGTGCGAGAAATAGGTCTCCTTTCACGGCAACTCAGTGGCAAGAACTAGAACAACAAGCTCTTATCTACAAATACATGGTCTCAGGGACCCCCATCCCACCTGATCTCGTTTACTCTATTAGAAGAAGTCTAGACTCTTCAATGTCTTCAAGGCTCTTCCCCCTCCATTCCATTGGATGGGGATGCCTCGACATGGGTTTTGGCAGAAAAGTAGACCCAGAACCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAGGAAGCATATCCAGATTCCAAGTACTGTGAAAGGCACATGCACAGAGGCAGAAACCGTTCAAGAAAGCCTGTGGAAGTTTCTTCAGCAACAACAAGCACTACAGCAAACACATCGCAAGCAATCTCATCTTATAATCACAGAAACCTTTCCATGAGCAACCCCAGTACAACCTCAACCGCTTCTTTCCCTTTCTCTCTATTGCCCTCATCTATGGCCTCTGATTCCCAGACCTATTCCCATCCTTATCAGAACTCTGCTCTTAACCCCTTGTTTTTCACCCATTCAACCTCTTCTAGACCTCTTGATTCTGACTTTTCACCTCCAAATAGCAATACCCACCAACTATTTTTGGACTCCGGATCTTATTCTCGGTATGAGAAGGATTATAGACATATTCATGGAATGAGGGAGGGTGTGGATGAGCGAGCTTTCTTCCCAGAAGCCTCAGGGAGTGCTCGGAGCTTTCTTTCTGATTCATATCAACAATTATCAATGAGCTCCTACAAATCCTATTCAAACTCCCAGTTTCAAAATATAAACGATAATTCAAGACAACATCAAGAGCAACATTGCTTTGTTTTGGGAAGTGACTTCAAATCACCATCAGGAACAATCAAAAGCAATGAGAACGAAACTGAGATGACCCAGAGGCCCCTTCACCACTTCTTTGGAGAGTGGCCTCCAAAGAACACAGATTCCTGGCTTGATCTTGCTTCCAACTCCAGAATCTCCACTGGTGATGATCTATAG 1032 0.4419 MISPSARNRSPFTATQWQELEQQALIYKYMVSGTPIPPDLVYSIRRSLDSSMSSRLFPLHSIGWGCLDMGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEVSSATTSTTANTSQAISSYNHRNLSMSNPSTTSTASFPFSLLPSSMASDSQTYSHPYQNSALNPLFFTHSTSSRPLDSDFSPPNSNTHQLFLDSGSYSRYEKDYRHIHGMREGVDERAFFPEASGSARSFLSDSYQQLSMSSYKSYSNSQFQNINDNSRQHQEQHCFVLGSDFKSPSGTIKSNENETEMTQRPLHHFFGEWPPKNTDSWLDLASNSRISTGDDL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0534 343 SMART QLQ_2 10 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi07g0534 343 PANTHER GROWTH-REGULATING FACTOR 5 10 329 IPR031137 GO:0005634|GO:0006351|GO:0032502
Glsi07g0534 343 Pfam WRC 77 119 IPR014977 -
Glsi07g0534 343 MobiDBLite consensus disorder prediction 106 133 - -
Glsi07g0534 343 Pfam QLQ 11 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi07g0534 343 ProSiteProfiles WRC domain profile. 76 120 IPR014977 -
Glsi07g0534 343 ProSiteProfiles QLQ domain profile. 11 46 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi07g0534 343 MobiDBLite consensus disorder prediction 117 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0534 Glsi-ChrGlsi07 4737114 4738323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0534 9 319 GRF Transcription Factor Family AT3G13960 41.783 4.72e-72 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Glsi07g0534 WRC 1.8e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0534 07 4737114 4738323 Glsi07g0534 07 4737114 4738323 ECH