Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0530 ATGGCCACTGCAAGTGATGACTCTATTAGGAGAGAAGTGAAGCCAAATGAAGCAATGACAAACGTGCCTCCCAGCAAGGGAGCTTGGACACCAAAAGAAGATAGGAAACTGGCAGAGGTTATTGCAGTTGAGGGGGCAAAAAGGTGGAAATCCATTGCAGCCAAAGCAGGCCTTACTAGGTGTGGTAAGAGTTGTAGACTAAGATGGTTGAACTATCTCAGACCCAACATCAAGAGGGGAAACATATCAGACCAAGAAGAGGATTTGATTCTTCGCCTTCATAAACTCCTCGGAAACAGGTGGTCTTTGATTGCCGGAAGATTACCGGGCCGAACAGATAATGAGATAAAGAACTACTGGAATTCTCATTTGAGCAAGAAGATAAAGCTGAGGGAGAAGCAAAGTGGGAGTTCAACAAGAGAAGGTAGTAGCATGTGTGAGAAAAGAATGGAGGAGGAGATTCCTGCGGAGCTAATTAGAGAAGAGAATGGAAATTTAACTGAGCGAGGTGTTGAAGGCATCTTTGATTTCTCCCAAGAAGAAGGTCCACTGAATCTGGAGTGGGTTAGCAGATTCCTTGAGATAGATGAGAGTTAA 597 0.4439 MATASDDSIRREVKPNEAMTNVPPSKGAWTPKEDRKLAEVIAVEGAKRWKSIAAKAGLTRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKLREKQSGSSTREGSSMCEKRMEEEIPAELIREENGNLTERGVEGIFDFSQEEGPLNLEWVSRFLEIDES 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0530 198 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 24 148 - -
Glsi07g0530 198 SUPERFAMILY Homeodomain-like 25 120 IPR009057 -
Glsi07g0530 198 CDD SANT 28 73 IPR001005 -
Glsi07g0530 198 CDD SANT 83 124 IPR001005 -
Glsi07g0530 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Glsi07g0530 198 Gene3D - 83 154 - -
Glsi07g0530 198 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Glsi07g0530 198 SMART sant 78 126 IPR001005 -
Glsi07g0530 198 SMART sant 25 75 IPR001005 -
Glsi07g0530 198 Gene3D - 26 78 - -
Glsi07g0530 198 MobiDBLite consensus disorder prediction 1 31 - -
Glsi07g0530 198 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Glsi07g0530 198 Pfam Myb-like DNA-binding domain 79 124 IPR001005 -
Glsi07g0530 198 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Glsi07g0530 198 FunFam MYB-related transcription factor 25 78 - -
Glsi07g0530 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 73 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0530 Glsi-ChrGlsi07 4718364 4719388 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0530 26 136 MYB Transcription Factor Family AT5G40330 63.964 1.40e-51 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi07g0530 Myb_DNA-binding 2.4e-16 CL0123