Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0528 ATGGCCACTGCAAGTAATGACTCTATTAAGAGAGAAGTGAAGTCAAATGAAGCCATGACAAACGTGCCTCTCTGGAAGGGAGCTTGGACACCAGAAGAGGATAGAAAACTGGCAGAGGTTATCGCTGTTCATGGGGCAAAAAGGTGGAAATCCATTGCAGCCAAAGCAGGCCTTACTAGGGGTGGTAAGAGTTGTAGACTAAGGTGGGTGAACTACCTCAGACCCAACATCAAGAGGGGAAACATATCAGATCAAGAAGAGGATTTGATTCTTCGCCTTCATAAACTCCTCGGAAATAGGTGGTCTTTGATTGCCGGAAGATTACCGGGCCGAACAGATAATGAGATAAAGAACTACTGGAATTCTCATTTGAGCAAGAAGATAAAGCTGAGGGAGAAGCAAAGTGGGAGTTCAACAAGAGAAGGTAGTAGCATGTGTGAGAAAAGAATGGTGGAGGGGATTCCTGCGGAGCTAATTAGAGAAGAGAATGGGAATTCAACTGAGCGAGGTGCTGAAGGCTCAAAACTCAATTTTGATGTTGATGGCATCTTTGATTTCTCCCAAGAAGAAGGTCCATTGAATCTGGAGTGGGTCAGCAGATTCCTTGAGCTAGATGAGGGTTAA 624 0.4487 MATASNDSIKREVKSNEAMTNVPLWKGAWTPEEDRKLAEVIAVHGAKRWKSIAAKAGLTRGGKSCRLRWVNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKLREKQSGSSTREGSSMCEKRMVEGIPAELIREENGNSTERGAEGSKLNFDVDGIFDFSQEEGPLNLEWVSRFLELDEG 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0528 207 Gene3D - 26 78 - -
Glsi07g0528 207 Gene3D - 81 151 - -
Glsi07g0528 207 CDD SANT 28 73 IPR001005 -
Glsi07g0528 207 ProSiteProfiles Myb-like domain profile. 26 73 IPR001005 -
Glsi07g0528 207 CDD SANT 83 124 IPR001005 -
Glsi07g0528 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Glsi07g0528 207 SMART sant 25 75 IPR001005 -
Glsi07g0528 207 SMART sant 78 126 IPR001005 -
Glsi07g0528 207 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 20 144 - -
Glsi07g0528 207 Pfam Myb-like DNA-binding domain 79 124 IPR001005 -
Glsi07g0528 207 Pfam Myb-like DNA-binding domain 26 73 IPR001005 -
Glsi07g0528 207 SUPERFAMILY Homeodomain-like 23 120 IPR009057 -
Glsi07g0528 207 FunFam MYB-related transcription factor 25 78 - -
Glsi07g0528 207 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Glsi07g0528 207 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 73 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0528 Glsi-ChrGlsi07 4688691 4689695 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0528 26 180 MYB Transcription Factor Family AT5G40330 52.229 4.68e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi07g0528 Myb_DNA-binding 4.4e-17 CL0123