Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0526 ATGGGAAGGAATCCTTGTTGTGCCAAGGAAGGTTTGAATAAAGGAGCATGGACTGCTATAGAAGACCAGATACTCATAGACTACATTAAGATTCACGGCGAAGGAAAATGGAGAGACCTACCCAAAAGAGCAGGGCTTAAAAGATGTGGGAAGAGTTGTAGGCTAAGATGGTTGAATTATCTAAGACCCGATATTAAACGAGGAAATATTACTCGTGATGAAGAGGATCTCATTATTAGGCTTCACAACCTTCTTGGAAACAGGTGGTCTTTGATAGCTGGACGTTTGCCAGGACGAACAGACAATGAAATCAAGAACTATTGGAATACCAATATTGGGAAGAAGCTTCAAAATGGTAACTTTAAATCCTCTACTACTTCAAGTGGAGGCCGTAGCTCATCAAGTTCAGCTGGGCAGGACCCAAACCACGAAACCCCACCAGATATGGGTCCATGTGTGGTTTATACTCAAGCAACAAGGTGCACCAATATAATAGTGAGCAAAGACCGAGCTCAACAACCCGAGCCATTAATGGTTGCAGCGCCCTCTGTGACCCCGGAATCAGAGACGTCATCGCCATCATTATCATTACCACATTTACATTATAAGGAGGATAATAATAACCCGTTGAGTAATTTCATGGAAGGTTTTGAGATGGATGAGAGCTTCTTTTCGGACCTGCTGACGATGGATATTGCAGAACCTTCTTGTTTTGAGAATAAAGTGGAAGATAGCAACGCTAGCCCAAGTGACGTAGGGTACAATAATTTATTATTATCTCCAAAGTCTGAGGACGCCACACACTTGCTCTCGGATGATAATTCTTTGCATGGGTCAGAGGATTTTCAGTCAATGTTAGCTTTGATGGAGTCTGAATTGGATTGGCTTTGA 891 0.4254 MGRNPCCAKEGLNKGAWTAIEDQILIDYIKIHGEGKWRDLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITRDEEDLIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGKKLQNGNFKSSTTSSGGRSSSSSAGQDPNHETPPDMGPCVVYTQATRCTNIIVSKDRAQQPEPLMVAAPSVTPESETSSPSLSLPHLHYKEDNNNPLSNFMEGFEMDESFFSDLLTMDIAEPSCFENKVEDSNASPSDVGYNNLLLSPKSEDATHLLSDDNSLHGSEDFQSMLALMESELDWL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0526 296 Gene3D - 70 138 - -
Glsi07g0526 296 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Glsi07g0526 296 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 191 - -
Glsi07g0526 296 CDD SANT 16 61 IPR001005 -
Glsi07g0526 296 MobiDBLite consensus disorder prediction 118 142 - -
Glsi07g0526 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Glsi07g0526 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Glsi07g0526 296 Gene3D - 7 66 - -
Glsi07g0526 296 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Glsi07g0526 296 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Glsi07g0526 296 CDD SANT 71 112 IPR001005 -
Glsi07g0526 296 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Glsi07g0526 296 MobiDBLite consensus disorder prediction 118 151 - -
Glsi07g0526 296 SMART sant 13 63 IPR001005 -
Glsi07g0526 296 SMART sant 66 114 IPR001005 -
Glsi07g0526 296 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Glsi07g0526 296 FunFam MYB-related transcription factor 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0526 Glsi-ChrGlsi07 4654139 4655372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0526 1 116 MYB Transcription Factor Family AT4G09460 75.862 2.16e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi07g0526 Myb_DNA-binding 5.4e-14 CL0123