Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0511 ATGTTGACTTGCATTGCTTGTTCGAAGCAGCTTAACAAAGGATCTCTTCCCCAACAAGATGAGCACAAAGCTGTGGAAACACCCAGCACCAAGCAAGCCATTAAGGCTCTTACTGCTCAGATCAAGGACATGGCAGTGAAAGCTTCTGGGGCCTATAGAAATTGCAAGCCTTGTTCAGGATCTTCCAATGACCGGAACCGAAACTATGCCGACTCTGATATGGCCTCAGATTCAGCCAGATTTCACTGTGCTTACCGCAGAACTGGAAGCTCCAATTCAACCCCAAGGCTTTGGGGGAAAGAAATGGAAGCGAGACTTAAAGGGCTTTCTAGCGGGGAAGGAACACCAGCATCAGTGAGCGGGCGTACTGAGTCTGTGGTGTTCATGGAGGAAGATGAGCCCAAGGAGTGGGTTGCTCAAGTGGAGCCTGGTGTGCTTATTACTTTTGTTTCATTGCCTCAGGGTGGGAATGATCTGAAGCGGATACGGTTCAGCCGCGAAATGTTTAATAAATGGCAAGCTCAAAGGTGGTGGTCGGAGAATTATGACAAGGTCATGGAGTTGTACAATGTTCAGAGGTTCAATCAACAAGCAGTTCCTCTCCCAACCCCACCCAGATCTGAAGATGAGATCTCAAAGATCGAATCTGTTAGGGACAGCCCTGTCACTCCTCCTCTTAGCAAAGAGCGGCCACCCCATCTTTTTTACCGTCAATTGGGAATGGGCTACTCCTCATCAGATTCACTGGATCACCACACGATGCAACCACACCCTTGCTATGAAACAAGTGGTCTAGCTTCAACCCCTAATCTTTCTGGCGTCAGTGGGGCAAAGACTGAAACATCATCGTTAGATGGTTCTGTAAGGACAAGTTCGTCAAGAGAGGAAGATCAGTCTGGTGAGCTTTCAATCAGCAATGCCAGTGATATGGAGACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACTATCCGAGCACTGCCAGGTGGAGCCAGAGAACTCAGGCGTGTCCGGTTCAGCCGAGAAAGGTTTGGTGAAATGCATGCCAGATTGTGGTGGGAAGAGAACCGTGCAAGGATACAAGAACAATATTTGTGA 1104 0.4837 MLTCIACSKQLNKGSLPQQDEHKAVETPSTKQAIKALTAQIKDMAVKASGAYRNCKPCSGSSNDRNRNYADSDMASDSARFHCAYRRTGSSNSTPRLWGKEMEARLKGLSSGEGTPASVSGRTESVVFMEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWSENYDKVMELYNVQRFNQQAVPLPTPPRSEDEISKIESVRDSPVTPPLSKERPPHLFYRQLGMGYSSSDSLDHHTMQPHPCYETSGLASTPNLSGVSGAKTETSSLDGSVRTSSSREEDQSGELSISNASDMETEWVEQDEPGVYITIRALPGGARELRRVRFSRERFGEMHARLWWEENRARIQEQYL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0511 367 MobiDBLite consensus disorder prediction 297 311 - -
Glsi07g0511 367 Pfam Transcription factor BRX N-terminal domain 24 58 IPR027988 -
Glsi07g0511 367 ProSiteProfiles BRX domain profile. 135 190 IPR013591 -
Glsi07g0511 367 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 367 IPR044532 -
Glsi07g0511 367 ProSiteProfiles BRX domain profile. 312 367 IPR013591 -
Glsi07g0511 367 MobiDBLite consensus disorder prediction 260 289 - -
Glsi07g0511 367 MobiDBLite consensus disorder prediction 199 231 - -
Glsi07g0511 367 Pfam Transcription factor regulating root and shoot growth via Pin3 311 366 IPR013591 -
Glsi07g0511 367 Pfam Transcription factor regulating root and shoot growth via Pin3 135 189 IPR013591 -
Glsi07g0511 367 MobiDBLite consensus disorder prediction 246 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0511 Glsi-ChrGlsi07 4536467 4539579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0511 1 367 Major Intrinsic Protein MIP AT1G31880 46.632 2.70e-102 304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0511 07 4536467 4539579 Glsi07g0511 07 4536467 4539579 ECH