Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0501 ATGGGATCTTCTCACCATGAAAAGGATAGAATGAGAGTTCTTTATGAGGCGTCATATAGAGGTTCTGTATCAACTTTGAACTCGTTGATACAAGAAGACCCTCTAGTCTTATACAAAATTAATTCACAAATCGTCTTCACTGAAACTCCCTTACACATATCAGCTTTGCTTGGCCACTTTGATTTCACAAAGACCCTTCTCACTCTCAAACCCCAACTCGCCCTTGATATGAACTCTTCCCGAAGCACAGCCCTCCACTTGGCTTCTGCAGAAGGCCACATTGACATTGTGAAGGAGTTGCTGCGAGTGCGTGACGAGGCATGCTTGGTTTCTGATCAAGAGGGGAGAATTCCCTTGCACTACGCAGTTATCAGAGGACGAATAGAGGTAGTGAAAGAGTTGATCAGAGAAAAGCCAGAGTCTTTGAAGATCCTTGACAATGGAAAAACAGTTTTGCACTTGTGTGTCACTTACAACCATTTGGATATCCTGAAAATTTTGGTGGAAATGGAACTTCACACCAGCGAGCTTCTCAACTTGAGAGACTTGAATGGCAGGAACACTATTCTCCATTTGGCCGTCATGTTGAAGCAAGTTGAGATCACAAGGTACCTGCTTTCAATTCCTCAAATAAGAGAAGCAGCAAGCTTGAAGAACGAAATGGGTTTTACAGCGCACGATATCATAGAGCGCAGTCCAAAAGACTTTAGAAGTCTTGAAATACAACTCATGTTGATGAACTCTGTCATCACTCATCCACAACCACCACCATCAACTTCTACTGATGGTGTTAAGCAAGCAGCAAGGCCTCTGAAGAAGAAAAATTGTTGGAGAACGATTGGTTCGAACTGTTCGTCGCCGGCAGCGAGGATGATGGGTTTCCCGGGTTTAAAAGTGGCGAAAATGAGCTTGAGTGAGGCCGAGGAAGATTCGGCTCAAGAAGTTCAAATCCCGGCCGATATTGACTGGCATATGCTTGATAAATCGAAGTTTTTCTTCCTTGGTGCTACGCTTTTCTCTGGGGTTTCGGCAACGCTGTACCCGATTGTTGTGTTGAAAACCCGGCAGCAAGTAGCTCAATCCCAAGTTTCCTGCATCAAAACTGCATTTTCACTTATTAGGCATGAGGGATTTCGAGCATTGTACAGAGGATTTGGTACTTCCTTGATGGGTACAATCCCAGCTCGAGCACTATATATGGCTGCCCTGGAGGTTACCAAGAGTAATGTAGGGACTGCCACAGTTAAGTTAGGGCTTGCAGAACCAACTGCAGCTGCAATTGCCAATGCAGTTGCAGGCTTGAGTGCAGCCGTGGCAGCTCAACTCTTGTGGACCCCCATTGACGTTGTGAGCCAGAGGTTGATGGTTCAGGGTGTTTGTAATTCAAAAAATCCTAAGGCCCCAGCACATCTATATATCAACGGGATTGATGCATTTAGGAAAATTCTTAACGCAGATGGTCCCAGGGGCTTGTATAGGGGGTTTGGGATATCAATTTTGACCTATGCACCGTCAAATGCAGTTTGGTGGGCTTCATACTCTGTCGCACAAAGACTGGTTTGGGGTGGAGTTGGGCACTACGGGTGCAAGAAAGATGATGAGAGAAGCGATACTGCAGCTAATGTATGGAGGCCAGATTCCAAAACAGTGATGGCAGTTCAGGGAGTCAGTGCAGCAATGGCGGGTGGCATGTCTGCTTTAATTACCATGCCACTGGACACAATTAAGACAAGACTTCAGGTCTTGGATGGTGATGAGAATGGCCGTCGAGGACCAACAGTTATGCAGACAGTGAGGAATTTGGTTAAGGAGGGTGGTTGGATGGCGTGTTACAGAGGATTGGGACCTCGATGGGCTTCAATGTCAGTGTCTGCCACAACAATGATCACTACCTACGAGTTTTTGAAACGGCTTTCCACGAAGAATCAAGACTTCCTGACATGA 1944 0.4588 MGSSHHEKDRMRVLYEASYRGSVSTLNSLIQEDPLVLYKINSQIVFTETPLHISALLGHFDFTKTLLTLKPQLALDMNSSRSTALHLASAEGHIDIVKELLRVRDEACLVSDQEGRIPLHYAVIRGRIEVVKELIREKPESLKILDNGKTVLHLCVTYNHLDILKILVEMELHTSELLNLRDLNGRNTILHLAVMLKQVEITRYLLSIPQIREAASLKNEMGFTAHDIIERSPKDFRSLEIQLMLMNSVITHPQPPPSTSTDGVKQAARPLKKKNCWRTIGSNCSSPAARMMGFPGLKVAKMSLSEAEEDSAQEVQIPADIDWHMLDKSKFFFLGATLFSGVSATLYPIVVLKTRQQVAQSQVSCIKTAFSLIRHEGFRALYRGFGTSLMGTIPARALYMAALEVTKSNVGTATVKLGLAEPTAAAIANAVAGLSAAVAAQLLWTPIDVVSQRLMVQGVCNSKNPKAPAHLYINGIDAFRKILNADGPRGLYRGFGISILTYAPSNAVWWASYSVAQRLVWGGVGHYGCKKDDERSDTAANVWRPDSKTVMAVQGVSAAMAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRNLVKEGGWMACYRGLGPRWASMSVSATTMITTYEFLKRLSTKNQDFLT 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0501 647 ProSiteProfiles Ankyrin repeat profile. 147 169 IPR002110 GO:0005515
Glsi07g0501 647 Pfam Mitochondrial carrier protein 552 642 IPR018108 -
Glsi07g0501 647 Pfam Mitochondrial carrier protein 341 409 IPR018108 -
Glsi07g0501 647 Pfam Mitochondrial carrier protein 426 520 IPR018108 -
Glsi07g0501 647 ProSiteProfiles Solute carrier (Solcar) repeat profile. 327 409 IPR018108 -
Glsi07g0501 647 SMART ANK_2a 46 75 IPR002110 GO:0005515
Glsi07g0501 647 SMART ANK_2a 114 144 IPR002110 GO:0005515
Glsi07g0501 647 SMART ANK_2a 185 214 IPR002110 GO:0005515
Glsi07g0501 647 SMART ANK_2a 9 38 IPR002110 GO:0005515
Glsi07g0501 647 SMART ANK_2a 147 176 IPR002110 GO:0005515
Glsi07g0501 647 SMART ANK_2a 80 109 IPR002110 GO:0005515
Glsi07g0501 647 Gene3D Mitochondrial carrier domain 331 645 IPR023395 -
Glsi07g0501 647 ProSiteProfiles Ankyrin repeat region circular profile. 147 169 - -
Glsi07g0501 647 Pfam Ankyrin repeats (3 copies) 114 169 IPR002110 GO:0005515
Glsi07g0501 647 Pfam Ankyrin repeats (3 copies) 14 101 IPR002110 GO:0005515
Glsi07g0501 647 ProSiteProfiles Solute carrier (Solcar) repeat profile. 424 519 IPR018108 -
Glsi07g0501 647 ProSiteProfiles Ankyrin repeat profile. 114 136 IPR002110 GO:0005515
Glsi07g0501 647 ProSiteProfiles Ankyrin repeat region circular profile. 114 136 - -
Glsi07g0501 647 ProSiteProfiles Solute carrier (Solcar) repeat profile. 549 638 IPR018108 -
Glsi07g0501 647 SUPERFAMILY Mitochondrial carrier 325 635 IPR023395 -
Glsi07g0501 647 ProSiteProfiles Ankyrin repeat region circular profile. 80 102 - -
Glsi07g0501 647 ProSiteProfiles Ankyrin repeat profile. 80 102 IPR002110 GO:0005515
Glsi07g0501 647 SUPERFAMILY Ankyrin repeat 9 229 IPR036770 -
Glsi07g0501 647 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 311 643 - -
Glsi07g0501 647 Gene3D - 3 231 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0501 Glsi-ChrGlsi07 4416589 4420970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0501 302 644 Chloroplast and Mitochondria Gene Families AT1G72820 75.434 0.0 524