Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0499 ATGACCACATCTCATCAAGAAGATGGTCAGAAAATGAGCCTTCTTTACGAGGCATCATATAAAGGCTGTGTGACAACTTTGAAGTCAATAATAGAGCAAGACCAATTGATCCTTTACAAAATCTCACAAAGTGCCTTCACTGAAACCCCCTTACACGTATCAGCTTTGCTTGGTCACCTTGATTTCACGAAGACCCTTCTCTCTCTCAAACCCCAACTCGCCCTTGAGTTGGACTCCTCCCGAAACACAGCCCTTCACTTGGCTTCTGCAGAAGGTCACATTGACATTGTGAAAGAGTTGCTAAATGCTTCTGAGCAGGCATGCTTGTATTTTGATGAAGACGGGAGAATTCCCTTGCACTACGCAGCCATGAGAGGGCGAATAGAGGTTGCGAGAGAGTTGATCAGAGCAAAGCCAGAGTCTTTGAGGATTCTTGACAAAGGGAAAACGGTTTTGCACTTGTGTGTAAGATACAACCAATTGGAGACCCTGAAAACTTTGGTGGAACTGGAGGTTGACACCAGCGAGCTTTTAAACTACAGAGACTTCGATGGCAAGAATACTATCCTCCATTTGGCTATCATGTTGAAGCAAGTTGAGACCATAAGAGTATGGGAAATTTGTTACGACATAGGGGTGATTGGTTAG 648 0.4429 MTTSHQEDGQKMSLLYEASYKGCVTTLKSIIEQDQLILYKISQSAFTETPLHVSALLGHLDFTKTLLSLKPQLALELDSSRNTALHLASAEGHIDIVKELLNASEQACLYFDEDGRIPLHYAAMRGRIEVARELIRAKPESLRILDKGKTVLHLCVRYNQLETLKTLVELEVDTSELLNYRDFDGKNTILHLAIMLKQVETIRVWEICYDIGVIG 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0499 215 Pfam Ankyrin repeats (3 copies) 114 172 IPR002110 GO:0005515
Glsi07g0499 215 Pfam Ankyrin repeats (3 copies) 16 103 IPR002110 GO:0005515
Glsi07g0499 215 Gene3D - 2 205 IPR036770 -
Glsi07g0499 215 ProSiteProfiles Ankyrin repeat profile. 114 136 IPR002110 GO:0005515
Glsi07g0499 215 ProSiteProfiles Ankyrin repeat profile. 80 102 IPR002110 GO:0005515
Glsi07g0499 215 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 13 199 - -
Glsi07g0499 215 ProSiteProfiles Ankyrin repeat region circular profile. 114 136 - -
Glsi07g0499 215 SUPERFAMILY Ankyrin repeat 6 203 IPR036770 -
Glsi07g0499 215 ProSiteProfiles Ankyrin repeat region circular profile. 80 102 - -
Glsi07g0499 215 SMART ANK_2a 10 39 IPR002110 GO:0005515
Glsi07g0499 215 SMART ANK_2a 147 176 IPR002110 GO:0005515
Glsi07g0499 215 SMART ANK_2a 114 144 IPR002110 GO:0005515
Glsi07g0499 215 SMART ANK_2a 46 75 IPR002110 GO:0005515
Glsi07g0499 215 SMART ANK_2a 80 109 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0499 Glsi-ChrGlsi07 4084325 4085888 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0499 50 203 Miscellaneous Gene Families AT2G31820 36.774 3.29e-21 89.4