Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0463 ATGTCGATGTCGCCGCGCATCAGAGGGACTTTGGTCTACCTCAAAGACCTTCCCGTTCCCGGGATAACTCTTGAATTGATCAGTGCTACCAAGCCCGACCGAGTTGTGACTGGAGATGCCACAACGCTATCTCAGAATAATATAACCACAATTTACTTTAATTGGAGTCCTGAGTTCGGAATCCCAGGAGCATTTCGGATATGGAACCGTGATCACAAAAATAATTTCTTTCTCGTGAGTTTTAAACTTGACCAGATTTCGAATCATGAGGATATCCATTTTGATTGCAACTCATGGGTTTACCCAGAAAAAACGTACAAATTTCCTCGCATTTTCTTCGCCAACAAGTCGTATCTTCCAACTCAAACCCCAGAGGCATTGCGCAAATACAGAGAACAAGAGCTGAAAGCTTTAAGAGGAGATGGAACTGGACAACGTTTGGATGGGGAAAGAATCTATGATTATGCTACCTACAATGATTTGGGCAATCCTGATCAAGATGATAGGCTAGCTCGTCCAGTTCTTGGAGGGTCTAACCAATATCCCTACCCTCGTAGGGGAAGAACTGGCAGGCCACCAACAAAAAAAGATCCGAACTCCGAGAGCCCACTTCCTGCAAATGAAGCCCTTAATGTCTATGTTCCAAGAGATGATAAATTTAGTGACCAGAAGTTGAAAGAATTTCTAGCTTATTTTCCAAAATCTCAAATTAATTCTCTCAAATCTTTTATACAAGCGTCATTGGAGCAACAGGGGAAAGAGTTTAAGAGCTATGAAGATATGCGTGATATACTCTTTAAAAATGGCTTTACATTTCCAGTGCCTCCTGAAGTGGATCCTGATGGCAAACTGGTATTAAAGTTTCCAATCCCAAGGGTCATTCAAGATAATTTGAATGGATGGATAACGGATGAAGAATTTGCACGAGAGATGCTTGCGGGTGTAAATCCTAATTTAATACGCCTTCTCAAAGAGTTCCCCCCACAAAGCAGCTTAGATGCTAAGGTCTACGGTGATCAAAGAAGTAAGATAACGAAAGAACACTTGCAAAAAAACCTCTATGGACTCACTGTAGATAAGGCACTTAATAGGCAGAAATTGTTCATATTGGATGACCATGACTCACTTATGCCATATTTGAGGCGGATTAACAATGAATTTTCTAGAAAGTCTTATGCAACTAGGACAATCCTTTTGTTGAAAGACGATGGGACTTTAAAGCCATTGGCCATTGAATTAAGTTTACCCCATCCCGACGGAGATCAGTTTGGTGCTGTTAGTGAAGTGTACACTCCCGAAGATGGTTCCCTTTGGCTATTGGCTAAAGGTTATGTAGTCGTAAATGACACGAGCTACAATCAACTTGTTAGCCATTGGTTAAATACTCATGCAGTCGTTGAGCCATTCGTCATATCAACAAATAGGCAACTGAGCGTTCTTCATCCTATTTATAAACTTCTGCATCCTCATTTTAAGGATAACATGTTTATAAATGCACTTGGTCGACAAACCTTAATTAATGCTGAAGGCAGTATAGAGGCTTTCTACTTGCCTGGAAAGTATTCTATGGAGTTTACTTCTATGCATTATAAAAATTGGGTTTTTCCGGACCAAACACTGCCAGCAGATCTTATCAGAAGAGGAATGGCAATTGAGGATCCAACTAAGCCTCATGGGCTTCGCCTTCTAATTGAGGACTACCCATATGCTGATGATGGACTAGAGATATGGGCGGCTATTGAGAAATGGGTTGAAGACTATGTCAATTACTACTATGGGTCAGATGACACTATTGAAAAAGACTCTGAACTACAAGCTTGGTGGAAAGAACTTGTAGAAGTTGGTCATGCCGACTTAAAAGATAAGCCTTGGTGGCCTAAGATGCAAAATCGTAAAGATCTTATTGATTCTTGCACTATTATCATCTGGCTTGCTTCAGCCTTCCATGCAGCTATCAATTTTGGACAGTTTCCTTATGGAGGTTATATTGTTAACCGTCCAACTCTCAGCAGAAGGCTTATACCCAGAAAAGGAACTCCAGAATATGATGAGCTGGTGAAGAACCCAGAAATAGGTTTCCTGAAAACAATTACACCAAAGTTGGAGACACTTATTGACCTTTCAACTTTAGAAGTATTGTCAGGCCATACTTCAGATGAAGTCTACCTTGGGACAAGAAACAGTCCTTACTGGACTTATGATGTAAAGCCGTTGGAGGCTTTTGAGGAATTCAGTAAGACATTAGCAAAAATTGAAGACAATATCATAAACAAGAACAATAATCCGAGTTTGAAAAACAGGAGAGGGCCAGTGAATCTGCCCTACACTCTGCTTTATCGTAGCAGTGAACAAGGAATGACATTCAAAGGAATTCCAAACAGTATTTCTATATAA 2394 0.4048 MSMSPRIRGTLVYLKDLPVPGITLELISATKPDRVVTGDATTLSQNNITTIYFNWSPEFGIPGAFRIWNRDHKNNFFLVSFKLDQISNHEDIHFDCNSWVYPEKTYKFPRIFFANKSYLPTQTPEALRKYREQELKALRGDGTGQRLDGERIYDYATYNDLGNPDQDDRLARPVLGGSNQYPYPRRGRTGRPPTKKDPNSESPLPANEALNVYVPRDDKFSDQKLKEFLAYFPKSQINSLKSFIQASLEQQGKEFKSYEDMRDILFKNGFTFPVPPEVDPDGKLVLKFPIPRVIQDNLNGWITDEEFAREMLAGVNPNLIRLLKEFPPQSSLDAKVYGDQRSKITKEHLQKNLYGLTVDKALNRQKLFILDDHDSLMPYLRRINNEFSRKSYATRTILLLKDDGTLKPLAIELSLPHPDGDQFGAVSEVYTPEDGSLWLLAKGYVVVNDTSYNQLVSHWLNTHAVVEPFVISTNRQLSVLHPIYKLLHPHFKDNMFINALGRQTLINAEGSIEAFYLPGKYSMEFTSMHYKNWVFPDQTLPADLIRRGMAIEDPTKPHGLRLLIEDYPYADDGLEIWAAIEKWVEDYVNYYYGSDDTIEKDSELQAWWKELVEVGHADLKDKPWWPKMQNRKDLIDSCTIIIWLASAFHAAINFGQFPYGGYIVNRPTLSRRLIPRKGTPEYDELVKNPEIGFLKTITPKLETLIDLSTLEVLSGHTSDEVYLGTRNSPYWTYDVKPLEAFEEFSKTLAKIEDNIINKNNNPSLKNRRGPVNLPYTLLYRSSEQGMTFKGIPNSISI 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0463 797 SMART LH2_4 5 115 IPR001024 GO:0005515
Glsi07g0463 797 MobiDBLite consensus disorder prediction 158 209 - -
Glsi07g0463 797 PRINTS Plant lipoxygenase signature 286 302 IPR001246 GO:0016491
Glsi07g0463 797 PRINTS Plant lipoxygenase signature 325 344 IPR001246 GO:0016491
Glsi07g0463 797 PRINTS Plant lipoxygenase signature 84 102 IPR001246 GO:0016491
Glsi07g0463 797 PRINTS Plant lipoxygenase signature 110 131 IPR001246 GO:0016491
Glsi07g0463 797 PRINTS Plant lipoxygenase signature 149 165 IPR001246 GO:0016491
Glsi07g0463 797 PRINTS Plant lipoxygenase signature 710 724 IPR001246 GO:0016491
Glsi07g0463 797 PRINTS Plant lipoxygenase signature 182 201 IPR001246 GO:0016491
Glsi07g0463 797 PRINTS Plant lipoxygenase signature 392 416 IPR001246 GO:0016491
Glsi07g0463 797 SUPERFAMILY Lipoxigenase 119 797 IPR036226 -
Glsi07g0463 797 Gene3D - 299 432 - -
Glsi07g0463 797 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 117 797 IPR013819 GO:0016702|GO:0046872
Glsi07g0463 797 Gene3D - 433 796 - -
Glsi07g0463 797 Gene3D - 119 223 - -
Glsi07g0463 797 Gene3D PLAT/LH2 domain 6 118 - -
Glsi07g0463 797 FunFam Lipoxygenase 433 796 - -
Glsi07g0463 797 Pfam Lipoxygenase 127 779 IPR013819 GO:0016702|GO:0046872
Glsi07g0463 797 PANTHER LIPOXYGENASE 21 797 IPR000907 GO:0016702|GO:0034440|GO:0046872
Glsi07g0463 797 FunFam Lipoxygenase 300 434 - -
Glsi07g0463 797 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 20 118 IPR036392 GO:0005515
Glsi07g0463 797 Gene3D - 224 298 IPR027433 -
Glsi07g0463 797 PRINTS Lipoxygenase signature 473 493 IPR013819 GO:0016702|GO:0046872
Glsi07g0463 797 PRINTS Lipoxygenase signature 453 470 IPR013819 GO:0016702|GO:0046872
Glsi07g0463 797 PRINTS Lipoxygenase signature 435 452 IPR013819 GO:0016702|GO:0046872
Glsi07g0463 797 ProSiteProfiles PLAT domain profile. 1 114 IPR001024 GO:0005515
Glsi07g0463 797 FunFam Lipoxygenase 119 223 - -
Glsi07g0463 797 ProSitePatterns Lipoxygenases iron-binding region signature 2. 480 490 IPR020834 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0463 Glsi-ChrGlsi07 3613455 3618547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0463 51 797 Acyl Lipid Metabolism Gene Families AT1G55020 55.802 0.0 889