Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0461 ATGGCCGTGCAAGTAAAATATAGTTTCTCTAATTATGAATTTTATGTGAAAATTTTTGCAGATGGGAATAAGGGGAAAGTTGGAAAAGAAGCACGTTTGGAAGGGATCTCGGACTCACGCGGAGGCAGGTCTAAATTCAGTGTTAATTTTGATTGGAATATGGGTGAGATGGGAATCCCAGGAGCATTTCAAATCAGCAACAAGCTTTCCTATGAGCTCTACCTAGAGAGTTTAACATTTGATGACATTCCGAATTATGGTCGCATCCATTTTGCTTGCGACTCATGGATTTCCCCAAAGGAAAGCCAACGCACTTTCTTCACCAACAAAGCATATCTCCCAAGTCAAACACCAAAGCTATTGGAGGATTACAGAAAAAAAGAGCTGGAAACTTTAAGAGGAAATGGACAAGGAGAACGCCAGATATGGGAGAGAATCTATGATTATGATGTCTACAATGATTTGGGCAATCCTGATGAACATGATAAGCTAGCTCGTCCAATTCTTGGAGGTTCTAGCGCACGTCCCTACCCTCGCAGGGGAAGAACTGGGAGGCCACGAACACAAAAAGATCCCCACTCTGAGAGCATACCTCAAGATGAAAACATCAAATTCTATGTGCCAAGAGATGAAGAATTTAGTGACATCAAGTTGGTAGAGATGGGGAAAGGTTTGCCCAAAGTTATAACTCAACGTTATTTGCTGAAGTTACTAGAGTTCCAGAGGCGTGGAATTCCGGTGCCTCAAGAAGTCTATAAGAGCCTGAAGGCTATAGGATATCCAGAGGAATTACTTCTAATTCATGACGAAAGCTACTTCGTCAACCTACTGCCGTTTCCATTTCCTAGTGACTTTAAAGTGGATGGTGTACAGATAAGTGACATAGAAATTGCAGCAGAGGTGCTTAAAGTTGTGAATCTCGATCTAATCCGCCCTATCACAGCGAAGCCCGCCCCAAAGAACAATCTAGACAGTATATTAAACCATAGCAAGTTTAAGGAAGGCTTCCCGGGGCTGAATATAGATAAGGCAATCGAAAAAGGTGATCACTTACACATACTAGATTACCATCCACACATAAACAAAAATACTTCCGATGAGTGCTACGCGGCCACTAGGACAATCATTTACAATGACAATGGTACTAAAAGGATATTGGCTATTGAATTAAGTGTACCTAAAGGTGACAAAGAACAATGCAGCGTCGAACCTGAAGTGCTCTTTGTCCCTCGTGATAATGGGCGTAATAATGGGTATTTGCGTTGGATATTGGCTATAGCTCATGTACTCATAAATGACTCAATTATTAGAGAAGCCAGGCCAATTACTCCTGCACCGTTTGTCAGCTTTGGAGATGTACGTGAAAAACTCTTTGGAAAGAACTTCGGAATTCCGGTGACTCTAGAAATCTATAATAGACTGAAGTCTATGGGATATCCAGATGAATTTCTTCTCACACATGGGGAACAGTATTTCGTCAAACTCCAGTTTCCAACTCCCAGTGTCATTAAAGAGGATGTGTTCGCATGGATGACTGACGAAGAATTTGCAAGACAGATGCTTGCTGGTGTGAATCCTAATGTTATCCACCGTATCAAAGACAAGCTCCCCCCAAATAGCGAACTAGACAAAGAAGAGTTGGGTAAAAAACTGAAGGAACTCACGAAACCGAATGGACTCACGGTGGATGAGGCAATCGTGAAAAAGAAATTATTCATATTAGATTATAATGACGCATTCTTGCCATATTTGGGGAAAATAGATTCTCAAACTCCCAATAAGGTTTATGCCACTCGAACACTCCTTTTCTTGAAAGACGATGGGACTTTGACGCCATTGGCCATTGAATTAAGTGTACCCGTGTTTTGCACGGTCATACGTAATGTCTATTACCCCGCAAAAGATGGTGTTGAGGGTTGCCGTTGGTTATTGGCTAAAGCTTATGTGATTGTAAATGACTCGGGCTATCATCAACTTATTAGTCACTGGCTAAATACTCATGCAGTGATTGAGCCCTTCGTCATTGCAACAAATAGACAGCTTAGTGTGCTTCACCCTGTTTATAAACTTCTGCGTCCTCATTTTCGTGACACCATGCGCATAAATGCAGATGCTCGTAGTAACTTGATCAATGCAAATGGCGTTATAGAGTCTTCATTCTTTCCTGGAAAGTATGCTATGCAGATGTCTTCTGAGGTTTACAAGAATTGGGATTTCACTAAGCAAGCATTGCCTAAAGATCTTGTGGAGAGGGGAATGGCAGATGAGAATCCATCTTTTCCTGATAAGCCTCGCCTTGTAATAAAGGACTACCCTTATGCTACTGATGGACTAGAGATTTGGAATGCTATTAAGACATGGGTTCAAGACTATGTCTCCTACTACTATGAGACAAATGACACCATTCGGAATGACTCTGAACTACAAGATTGGTGGAAAGAACTTGTAGAAGTGGGTCATGGCGACTTAAAAAATAAGCCCTGGTGGCCTAAAATGCAAACTCGCAAAGACCTTATTGAATCTTGCACTATTATCATCTGGATCGCTTCAGCGCTACATGCAGCTGTCAATTTTGGTCAGTATCCCTATGGAGAAGTACTGTCAACTCATACTTCCGATGAGGTCTACCTTGGAACAAGAGACAATCCTAAAGATTGGACGTATGATGCAAAGCCATTGGAGGATTTCGAGAAGTTTAAGAAGAAATTGGAAGAGATTGAGAAAAGAATGGTGGAGATGAACGAACAGAAACTGAAAAACAGGATTGGACCAGTCAAGATGCCTTACACTCTGCTTTATCCTAGCAGTGAACCCGGAGTGACAGGCAGAGGAATTCCAAATAGTATTTCTATATGA 2856 0.4156 MAVQVKYSFSNYEFYVKIFADGNKGKVGKEARLEGISDSRGGRSKFSVNFDWNMGEMGIPGAFQISNKLSYELYLESLTFDDIPNYGRIHFACDSWISPKESQRTFFTNKAYLPSQTPKLLEDYRKKELETLRGNGQGERQIWERIYDYDVYNDLGNPDEHDKLARPILGGSSARPYPRRGRTGRPRTQKDPHSESIPQDENIKFYVPRDEEFSDIKLVEMGKGLPKVITQRYLLKLLEFQRRGIPVPQEVYKSLKAIGYPEELLLIHDESYFVNLLPFPFPSDFKVDGVQISDIEIAAEVLKVVNLDLIRPITAKPAPKNNLDSILNHSKFKEGFPGLNIDKAIEKGDHLHILDYHPHINKNTSDECYAATRTIIYNDNGTKRILAIELSVPKGDKEQCSVEPEVLFVPRDNGRNNGYLRWILAIAHVLINDSIIREARPITPAPFVSFGDVREKLFGKNFGIPVTLEIYNRLKSMGYPDEFLLTHGEQYFVKLQFPTPSVIKEDVFAWMTDEEFARQMLAGVNPNVIHRIKDKLPPNSELDKEELGKKLKELTKPNGLTVDEAIVKKKLFILDYNDAFLPYLGKIDSQTPNKVYATRTLLFLKDDGTLTPLAIELSVPVFCTVIRNVYYPAKDGVEGCRWLLAKAYVIVNDSGYHQLISHWLNTHAVIEPFVIATNRQLSVLHPVYKLLRPHFRDTMRINADARSNLINANGVIESSFFPGKYAMQMSSEVYKNWDFTKQALPKDLVERGMADENPSFPDKPRLVIKDYPYATDGLEIWNAIKTWVQDYVSYYYETNDTIRNDSELQDWWKELVEVGHGDLKNKPWWPKMQTRKDLIESCTIIIWIASALHAAVNFGQYPYGEVLSTHTSDEVYLGTRDNPKDWTYDAKPLEDFEKFKKKLEEIEKRMVEMNEQKLKNRIGPVKMPYTLLYPSSEPGVTGRGIPNSISI 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0461 951 SUPERFAMILY Lipoxigenase 463 951 IPR036226 -
Glsi07g0461 951 SUPERFAMILY Lipoxigenase 113 438 IPR036226 -
Glsi07g0461 951 Gene3D - 654 866 - -
Glsi07g0461 951 PANTHER LIPOXYGENASE 865 951 IPR000907 GO:0016702|GO:0034440|GO:0046872
Glsi07g0461 951 Pfam PLAT/LH2 domain 24 106 IPR001024 GO:0005515
Glsi07g0461 951 PRINTS Lipoxygenase signature 639 656 IPR013819 GO:0016702|GO:0046872
Glsi07g0461 951 PRINTS Lipoxygenase signature 657 674 IPR013819 GO:0016702|GO:0046872
Glsi07g0461 951 PRINTS Lipoxygenase signature 677 697 IPR013819 GO:0016702|GO:0046872
Glsi07g0461 951 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 21 112 IPR036392 GO:0005515
Glsi07g0461 951 MobiDBLite consensus disorder prediction 162 201 - -
Glsi07g0461 951 SMART LH2_4 1 109 IPR001024 GO:0005515
Glsi07g0461 951 Coils Coil 896 916 - -
Glsi07g0461 951 ProSitePatterns Lipoxygenases iron-binding region signature 1. 657 671 IPR020833 GO:0016702|GO:0046872
Glsi07g0461 951 FunFam Lipoxygenase 113 216 - -
Glsi07g0461 951 Gene3D - 867 950 - -
Glsi07g0461 951 PRINTS Plant lipoxygenase signature 176 195 IPR001246 GO:0016491
Glsi07g0461 951 PRINTS Plant lipoxygenase signature 369 393 IPR001246 GO:0016491
Glsi07g0461 951 PRINTS Plant lipoxygenase signature 104 125 IPR001246 GO:0016491
Glsi07g0461 951 PRINTS Plant lipoxygenase signature 81 99 IPR001246 GO:0016491
Glsi07g0461 951 PRINTS Plant lipoxygenase signature 143 159 IPR001246 GO:0016491
Glsi07g0461 951 Gene3D - 527 653 - -
Glsi07g0461 951 Gene3D - 313 433 - -
Glsi07g0461 951 ProSitePatterns Lipoxygenases iron-binding region signature 2. 684 694 IPR020834 GO:0016702|GO:0046872
Glsi07g0461 951 Gene3D - 131 233 - -
Glsi07g0461 951 ProSiteProfiles PLAT domain profile. 1 111 IPR001024 GO:0005515
Glsi07g0461 951 MobiDBLite consensus disorder prediction 184 201 - -
Glsi07g0461 951 Gene3D - 437 526 IPR027433 -
Glsi07g0461 951 Pfam Lipoxygenase 446 864 IPR013819 GO:0016702|GO:0046872
Glsi07g0461 951 Pfam Lipoxygenase 121 436 IPR013819 GO:0016702|GO:0046872
Glsi07g0461 951 Pfam Lipoxygenase 865 934 IPR013819 GO:0016702|GO:0046872
Glsi07g0461 951 Gene3D PLAT/LH2 domain 16 130 - -
Glsi07g0461 951 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 111 951 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0461 Glsi-ChrGlsi07 3561629 3566097 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0461 407 951 Acyl Lipid Metabolism Gene Families AT1G55020 51.471 0.0 562