Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0453 ATGGCACTACGGAGATTAAGGGCGAGGCTTCGGAGGAGCCATCTTTACACATTTGCTTGCCTTAAGCGAACTGCAACTGCACAGGAGCCTCCTCATCCTCTTGAAGGTCCTGGTTTCTCAAGAATTGTACACTGCAACCAGTCTCATCTCCATGAAAAGAAACCATTATTTTACTGCAGGAATGATATATCAACTACGAAATACAGTATTATTACATTTTTACCTACGGCACTCTTTGAGCAATTTCGACGGGTTGCTAATATATACTTTCTTGTGGCTGCATGCCTATCATTCTTTCCGCTCTCACCGTTCTCTCCAGTGAGCATGGTTGCTCCTTTGGCATTTGTTGTTGGGCTCAGTATGGCAAAGGAAGGATTGGAAGATTGGCGCAGGTACCGTCAGGATGTCACAGTTAATCACCGGAAAGCTAGTGTCCACATCGACAATGGTGGTTTTGATTTGAGGCAATGGCAGGAAATTAAGGTTGGGGATGTGGTGAAGGTAGATAAGGATCAGTTTTTTCCTGCTGATTTGCTTTTCTTGGCATCAAGTTATGAGGATGGTATATGCTATGTGGAAACTATGAATTTAGATGGTGAGACGAACCTGAAGGTGAAAAGAACTTTGGAGGTTACCTTGCCTCTGTTTAAAGACGAAGCTTTTAAAGATTTCACAGCAACAATACGTTGTGAAGACCCAAATCCTAATCTTTACACATTTGTTGGAAACTTGGAATATGAATGTGAGGTTTATCCTATTGATCCTAGTCAAATTCTCCTTCGAGATTCAAAGCTCAGGAACACTGATTACATCTATGGGGTGGTCATTTTCACTGGTCATGATAGTAAAGTGATGCAGAATTCTACAAGATCTCCTTCAAAAAGGAGCAGAATAGAAAAAAAAATGGATTACATCATTTACCTTCTTTTCACTGTTCTTATTTTCGTATCATTGATCAGTTCAATAGGATTTGCTGTAAAGACTAAATTCGAAACAATAGATTGGTGGTACATACGGCCCAAGGAAACTGAAACCCAGTATGACCCCAGTAATGCTGCGTTGGCAGGGATGATTCATCTGATTACGGCACTCATTCTTTATGGGTATTTGATACCCATATCACTTTATGTATCAATTGAGGTTGTGAAGGTTTTACAAGCAACCTTGATCAATCAAGACATACAATTGTATGATGAAGAATCCGGGACTCCGGCTGATGCACGAACATCAAATTTGAATGAAGAATTGGGTCAGGTGGACACTATACTTTCTGATAAGACTGGCACTTTAACATGCAATCAGATGGATTTTTTAAAGTGCTCCATTGCTGGTACTGCATATGGTATCCGTCCCAGTGACGTTGAACTCGCAGCAGAAAAGCAGATGGCTTCTGATCTTGAGGAGGAGTCGGACCTGTCTAATTTTCCCATGGATAAAAGGAAAGTACATGTTTCGTGGGAAAATGTTGAACTGGAGACTGTTGTTACTTCCAAGGGCGATGAGGATCAAAAGCCTGCCATAAAATTTTTCAGTTTTGAGGACGAACGCCTCATGAATCGTAACTGGTTGAAAGAGCCCAATCCTGATGTCCTTTTGTTGTTTTTCCGAATATTAGCTGTTTGTCATACCGCCATTCCTGAGCTGAATGAGGAAACTGGCAGTTTGACTTATGAGGCCGAGTCACCTGATGAAGGGGCTTTTCTTGTAGCAGCAAGAGAATTTGGTTTTGAGTTTTGTAGAAGAACTCAAGCAAGTGTTTTCATCCGTGAAAAATTTTCAAATTCTGGAGAAGCTGTTGAAAGGGAGTACAAAATCCTGAATCTGTTGGATTTCACTAGCAAGAGAAAGAGAATGTCAGTGATTGTGCGTGACGAGGAGGGCAGCCTTTTTCTTTTTTGCAAAGGGGCTGACAGTATCATATTTGATCGAATGTCAAAGAGTGGAAAGATGTATTTGGAGGCTACTACCAGGCATTTGAATGAATATGGAGAAGCAGGTCTGAGAACATTGGCCCTAGCTTATAGAAAGCTAGATGAGCAAGAGTACTCTGCTTGGAACAGTGAGTTTCTGAAGGCCAAAACATCTGTTGGGCCTGACAGAGAGACGGCGCTTGAGCAAATAGCTGATACGATGGAAAGAGAGCTGATTCTTGTTGGGGCCACTGCTGTAGAAGACAAACTGCAAAAAGGGGTGCCACAGTGCATTGATAAACTAGCACAAGCTGGTCTCAAGATCTGGGTTTTGACAGGGGATAAGATGGAAACTGCAATCAACATTGGTTTCTCTTGTAGTTTGCTTCGTCAGGGCATGAAGCAAATCTGTATAACTACTATAGATTCAGACTCGGTTACCAACTATGACAAAGAGGCCATCAAGGAAAACATTTTGAATCAAATAATCAATTCCTCACAAATGATAAAGCTGGAGAAAGATCCACATGCCGCATTTGCATTAATTATTGATGGGAAGACTCTGGCATATACATTAGAAGATGATATGAAGCATCAATTTTTGGGACTGGCTGTTGATTGTGCTTCTGTCATATGTTGTCGTGTGTCTCCCAAGCAAAAGGCATTGGTAACAAGGTTAGTTAGAGAAGGCACAGGGAGGACCACTTTAGCAATAGGTGATGGTGCAAATGACGTTGGCATGATTCAAGAAGCAGATATTGGTGTTGGTATCAGCGGAGTTGAAGGTATGCAGGCGGTGATGGCTAGTGACTTTGCTATTGCCCAATTTAGATTTTTGGAGCGGCTTTTGGTAGTCCATGGACACTGGTGTTACAAGAGAATAGCACAAATGATATGCTATTTCTTCTACAAAAACATAGCATTTGGCCTGACCCTCTTTTATTTTGAGGCCTTTACGGGCTTCTCCGGGCAATCGGTTTATGATGACTGGTACATGATCTTGTTCAATGTCGTTCTTACGTCATTGCCTGTCATTTCACTTGGAGTTTTTGAACAAGATGTTTCATCTGAAGTTTGCTTACAGTTTCCTGCACTGTATCAGCAAGGCCCCAAAAATTTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGCAATGGTCTTTATGCCTCCATCATAATCTTCTTCCTTAACCTCCTCATCTTCTACAACCAAGCATTTCGTGTTGAAGGCCAAATCACAGATATGGCTACTGTTGGTACCGCAATGTTTACCTGCATTGTTTGGGCTGTCAATTGCCAGATCGCGCTAACAATGAGCCATTTTACATGGATCCAGCACGTACTTATTTGGGGCAGTATAACTGCTTGGTATGTCTTTCTCCTGCTATATGGCATGCTTCCTCCAAAGATTTCCAAGGATGCCTACCAAATACTGGTTGAAGTTCTTAGTCCATCACCTCTATATTGGGGAGCGACCCTTATAGTAACAGTTGCATGCAATCTTCCTTATTTTGCTCACATATCCTTGCAAAGATCTTATAATCCCTTGGATCATCACATCATCCAAGAAATCAAGTATTACAAGAAGGACATTGAGGACCAACGCATGTGGACGAGGGAACGATCTAAAGCAAGACAGGAAACTAAGATTGGATTCACTGCAAGAGTAGAAGCAAAGATGAGGCAGTTGAAAGAGAAGCTGCAGAAGAAGCAATCAGCCTTGAATTTTACATCATAG 3651 0.4163 MALRRLRARLRRSHLYTFACLKRTATAQEPPHPLEGPGFSRIVHCNQSHLHEKKPLFYCRNDISTTKYSIITFLPTALFEQFRRVANIYFLVAACLSFFPLSPFSPVSMVAPLAFVVGLSMAKEGLEDWRRYRQDVTVNHRKASVHIDNGGFDLRQWQEIKVGDVVKVDKDQFFPADLLFLASSYEDGICYVETMNLDGETNLKVKRTLEVTLPLFKDEAFKDFTATIRCEDPNPNLYTFVGNLEYECEVYPIDPSQILLRDSKLRNTDYIYGVVIFTGHDSKVMQNSTRSPSKRSRIEKKMDYIIYLLFTVLIFVSLISSIGFAVKTKFETIDWWYIRPKETETQYDPSNAALAGMIHLITALILYGYLIPISLYVSIEVVKVLQATLINQDIQLYDEESGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGIRPSDVELAAEKQMASDLEEESDLSNFPMDKRKVHVSWENVELETVVTSKGDEDQKPAIKFFSFEDERLMNRNWLKEPNPDVLLLFFRILAVCHTAIPELNEETGSLTYEAESPDEGAFLVAAREFGFEFCRRTQASVFIREKFSNSGEAVEREYKILNLLDFTSKRKRMSVIVRDEEGSLFLFCKGADSIIFDRMSKSGKMYLEATTRHLNEYGEAGLRTLALAYRKLDEQEYSAWNSEFLKAKTSVGPDRETALEQIADTMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICITTIDSDSVTNYDKEAIKENILNQIINSSQMIKLEKDPHAAFALIIDGKTLAYTLEDDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVREGTGRTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAFTGFSGQSVYDDWYMILFNVVLTSLPVISLGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYASIIIFFLNLLIFYNQAFRVEGQITDMATVGTAMFTCIVWAVNCQIALTMSHFTWIQHVLIWGSITAWYVFLLLYGMLPPKISKDAYQILVEVLSPSPLYWGATLIVTVACNLPYFAHISLQRSYNPLDHHIIQEIKYYKKDIEDQRMWTRERSKARQETKIGFTARVEAKMRQLKEKLQKKQSALNFTS 1216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0453 1216 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Glsi07g0453 1216 Pfam Phospholipid-translocating ATPase N-terminal 43 109 IPR032631 -
Glsi07g0453 1216 SFLD p-type atpase 406 926 IPR044492 -
Glsi07g0453 1216 Pfam Phospholipid-translocating P-type ATPase C-terminal 903 1153 IPR032630 -
Glsi07g0453 1216 Coils Coil 1191 1216 - -
Glsi07g0453 1216 FunFam Phospholipid-transporting ATPase 119 289 - -
Glsi07g0453 1216 SUPERFAMILY Calcium ATPase, transduction domain A 146 287 IPR008250 -
Glsi07g0453 1216 Gene3D - 433 454 IPR023299 GO:0000166
Glsi07g0453 1216 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 32 1179 - -
Glsi07g0453 1216 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1150 IPR023298 -
Glsi07g0453 1216 Gene3D - 714 915 IPR023214 -
Glsi07g0453 1216 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 517 680 IPR023299 GO:0000166
Glsi07g0453 1216 FunFam Phospholipid-transporting ATPase 718 915 - -
Glsi07g0453 1216 CDD P-type_ATPase_APLT_Dnf-like 60 1034 - -
Glsi07g0453 1216 Gene3D - 420 432 IPR023214 -
Glsi07g0453 1216 NCBIfam phospholipid-translocating P-type ATPase 58 1161 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Glsi07g0453 1216 Pfam Cation transport ATPase (P-type) 540 645 - -
Glsi07g0453 1216 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Glsi07g0453 1216 PRINTS P-type cation-transporting ATPase superfamily signature 875 894 - -
Glsi07g0453 1216 Gene3D - 583 694 IPR023299 GO:0000166
Glsi07g0453 1216 SFLD C1.7: P-type atpase like 406 926 - -
Glsi07g0453 1216 Gene3D - 122 289 - -
Glsi07g0453 1216 FunFam Phospholipid-transporting ATPase 585 716 - -
Glsi07g0453 1216 NCBIfam HAD-IC family P-type ATPase 847 956 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi07g0453 1216 SUPERFAMILY HAD-like 411 919 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0453 Glsi-ChrGlsi07 3511735 3517418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0453 1 1213 Primary Pumps ATPases AT1G17500 73.372 0.0 1903