Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0448 ATGGAAAAGGTAGCTATGAGACCTGAAGACTTTGAGTTCAATGAACGAGAAATGGCATTGAGAAGTACAAGTAGTCTGAGGAAGGGAAATTTCATTGACTTCTGTAATAAGCTTGATGGGTTTGATGAAGTTATTACTCCTGAAGAATCTACATGCGCGAAGAGAAGGAAGGTGAAAATTGTGGAGCTCCAAACTACATCATTCTCGTTCAAATATCTGGTTTCAGAAAATTGTCGTTTGCCGAAACCCAGAATTTGGATTTCTCCAAAGTCCATTGGCGAGCTTGACATGGCTGCTATAAAGCTGCAGAAAGTTTACAAAGGTTACCGAACTAGAAGAAATCTTGCAGACTGCGCTATTGTTTGTGAGGAGCTATGGCGGAAGGGTATAGACTTGGCTGCTCTTAGCCGGGGCTCTATTTCACATTTGGATAAATCAGAAACAGCTGCTTCAAAGTGGGCACGAGCTGGTACAATGGCTGCTAAGAAGAAAGGCCTATTTCAGCACTCAAGTTTTCTAGCTGGCGGTGCTACCATTGCATCTGGAAGACTGGTTGCCTACAATGGAGTTCTTGATGCTATATGGCCCTATAGTGGTCATTACTGTCCAACAGAGAAGAATCTCATGGAGTTCGTTGGCTTCTTGGAAGAATATAATGTGGACTTGACAAATGTAAAGAAATATGCAATTGATGATGATGTGCCTCCTTCTGAACCTGTTGATGAGGAACTTGAACTTCAGTGTGAGGGCATAGAAGGTAACGTGGGTGCAAGTGAAAAAAGTGTGGCTCACTTTGGTACCAATGTGGAAGCAGCTTCACAAGTCAAAGAGAGCAAGCCATTGTCAACCAAATGGACTACTGGGGCTGGTCCTCGGATTGCTTGTGTGAGAGAGTACCCAACAAAACTCCAAGTTCATGCACTTGAACAGCTCAATCTATCACCTAGGACTATCCCCGGAAAATATGCTTGCAAAGCTCCTATACCCTCCCCAAGGCCTAGTCCAAAATTTCATTTCTCCCCTAAGCTTGTGCATATGGGACTTCCTAGCCCACGGGAGAAAGTTGGTGATAAGAGTAAGAAGAAGTGGAGGCTATGGAGAAGCTCTTCAGAAGGCTATGGATCTGGATCCTCCATGAAAAGTATGAATAAGGGACGCGTTGCGGCATCTGAGAAATCTGATTCTTCGTTCGTGGTGGATGATGCATTTACTGCTGCCATGGCTACCGTGGTCCAAGCTGCACCTAAAGATTTCGCGGTAATCAAGCAGGAATGGGCTGCGATCCGCATTCAATCTGTGTTTCGAGGTTTCTTGGTAAGTAGGATTCTTCGCTCCTTAGCTAAGTTCAAACCTTTGCAAAAGCATGCCTGTTACTCTGCTTTTCAAATCTTTTCTCTTCGGATTTTTGAGCAAGGATGGTGTGACATTCTAGGAACTGTTGATGAAGTTAAAGCAAAGATACAAATGAAGCAAGAAGCAGCTATCAAGAGGGAGAGAGCGATGGCATATTCTCTCTCTGCACAGCAATCACGAGCAAGTGCTAGCCCAAAATCAAGAACCACTAAGCCAGTGCATTTACTGGAGAATCGTGGCCTAGACAACAAGAGATTGGGATGGAGTTTAGAGCACTGGATGTCAACCAAGCCATGGGAAAACAGGTTGATGGAAGGGACCTATTTTGATGCACCTGACATGACTCCGGTACCCAGGAAAACTGATGATCTTGTTCTCCCCTTTCATTCATATCAAGAATACGGCTTCGTCAAAGCAAGGAGGAACGGTGTGACAACCAGGGTTTCTGCTAAATCTCTTACAACAAGTCAATCGACTCCATCATCTTCAGCCATAAGTTCTGACTGCATGTATGATGATAGCCCTGTATCAACTTCATATCCATCCGAATCACCACCATCTCTGCCATCTACCAACACTCTTGTAGAGGAAACAATAGAGGAAACCACTGTTCATAAACCAAGCTACATGAACCTGACAGAGTCAACTAAGGCTAAACAAATAGCTTGCACATTTTCTTGTCAGAACCCAAAGAGACTCTTAGTGGAGGATTGTCTGAATGGAGATACTACTAGAAGCTATTCTAGTTCTGATCCTTCAGTTAACTTGTGGAAAGGTCTTTGTGCAACACCTCAAAGGTTAAGTCACCAAAAGAGAAACTCTGGGAGACAAAGGGTTGCCATAACAATGGCAGGCTTAGTTTAA 2217 0.4384 MEKVAMRPEDFEFNEREMALRSTSSLRKGNFIDFCNKLDGFDEVITPEESTCAKRRKVKIVELQTTSFSFKYLVSENCRLPKPRIWISPKSIGELDMAAIKLQKVYKGYRTRRNLADCAIVCEELWRKGIDLAALSRGSISHLDKSETAASKWARAGTMAAKKKGLFQHSSFLAGGATIASGRLVAYNGVLDAIWPYSGHYCPTEKNLMEFVGFLEEYNVDLTNVKKYAIDDDVPPSEPVDEELELQCEGIEGNVGASEKSVAHFGTNVEAASQVKESKPLSTKWTTGAGPRIACVREYPTKLQVHALEQLNLSPRTIPGKYACKAPIPSPRPSPKFHFSPKLVHMGLPSPREKVGDKSKKKWRLWRSSSEGYGSGSSMKSMNKGRVAASEKSDSSFVVDDAFTAAMATVVQAAPKDFAVIKQEWAAIRIQSVFRGFLVSRILRSLAKFKPLQKHACYSAFQIFSLRIFEQGWCDILGTVDEVKAKIQMKQEAAIKRERAMAYSLSAQQSRASASPKSRTTKPVHLLENRGLDNKRLGWSLEHWMSTKPWENRLMEGTYFDAPDMTPVPRKTDDLVLPFHSYQEYGFVKARRNGVTTRVSAKSLTTSQSTPSSSAISSDCMYDDSPVSTSYPSESPPSLPSTNTLVEETIEETTVHKPSYMNLTESTKAKQIACTFSCQNPKRLLVEDCLNGDTTRSYSSSDPSVNLWKGLCATPQRLSHQKRNSGRQRVAITMAGLV 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0448 738 Pfam IQ calmodulin-binding motif 97 114 IPR000048 GO:0005515
Glsi07g0448 738 Pfam IQ calmodulin-binding motif 425 441 IPR000048 GO:0005515
Glsi07g0448 738 PANTHER IQ DOMAIN-CONTAINING PROTEIN IQM3 62 162 IPR044159 -
Glsi07g0448 738 ProSiteProfiles IQ motif profile. 423 451 IPR000048 GO:0005515
Glsi07g0448 738 SMART iq_5 94 116 IPR000048 GO:0005515
Glsi07g0448 738 SMART iq_5 422 444 IPR000048 GO:0005515
Glsi07g0448 738 MobiDBLite consensus disorder prediction 598 642 - -
Glsi07g0448 738 ProSiteProfiles IQ motif profile. 95 124 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0448 Glsi-ChrGlsi07 3367904 3375316 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0448 365 671 IQD Protein Family AT2G26180 36.158 8.70e-48 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0448 07 3367904 3375316 Glsi06g0411 06 3542430 3549957 CCT