Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0422 ATGGCAAGGCTTTGTGATTTAAGGTTGCTATTCTTTCCATTAGCTGCTGTTGTTGGCCAGAAAATAAGGGGACCCTCCAGAAACAGCCCATCTGCCTCGGCCTTCCCCGCCGGAGACGCAGCTGATATCTCTCGTCATCCTCTCTTTCTTTCTTTTTCCAGTAGAATGAACATCCCAAGGAATGGTAACTGCACCAACAACAACTACCAGGCTTGTGCTGCTTGTAAGTACCAACGCAAGAAGTGCGCTCCCGACTGCATTCTCGCACCTTATTTTCCTCACGATCGCCAGCGACAATTCCTCAATGCCCATAAATTATTTGGGGTCAGAAACATCACCAAGATCATTGAGCACCTTGGCCCTCATGACAAAGACGAAGCCATGCGTACTATAATCTACCAATCTGACATGCGAGCTCATGACCCTGTTGGGGGTTGCTATAGATACATTCAAGAGTTACAAGCCCAAATCGAATACCATAAAGCAGAACTCGACCTTGTTCTTCACCAGCTTGCCATTTTTCAAGCACAAGCTCAAGCACAAGTTTACAATGTGAATGGGAATGAAGTAATGAATTCAGATAATTTGAATTTGTACGACCCACTTTCCCCACATTACCAATACCTTCAACAAGTGCCACAGCCGGAGCAGTACATAATGGTCCAAGAAAATCATGCTACTACTAATAATAATAACATCTCTTTGCAGCAGGAAGATGTTAACACATGGGCTATGCAGGATTCTATGTCTCTGTCATCCTTATCATTTCAGAGCAAAAATGGGAGTGCTTACGTTGGTGATCAATATGATCAAGAAAGAAATCTCAGATTGGAGCATGAAGAATTAGTGAACGACAGGTTTGTTTGGCTACTATCAATTAATCTTCTAGACCACAGTTTACAATGGGAAACTTTTTCTGCAATTTTGCTTGCACATATTATAAAGGGAATTGTACCAGATATTAGGAGTGATGGAACGGTTTTGTTTAAAGTGAAAGCAGAGGGTGGCTGCGTTCATCAAGTTCAAGATCATGATCTAAAAGGAGCAGCAACTTTGACGACATTTCAATTTCCATGA 1077 0.4234 MARLCDLRLLFFPLAAVVGQKIRGPSRNSPSASAFPAGDAADISRHPLFLSFSSRMNIPRNGNCTNNNYQACAACKYQRKKCAPDCILAPYFPHDRQRQFLNAHKLFGVRNITKIIEHLGPHDKDEAMRTIIYQSDMRAHDPVGGCYRYIQELQAQIEYHKAELDLVLHQLAIFQAQAQAQVYNVNGNEVMNSDNLNLYDPLSPHYQYLQQVPQPEQYIMVQENHATTNNNNISLQQEDVNTWAMQDSMSLSSLSFQSKNGSAYVGDQYDQERNLRLEHEELVNDRFVWLLSINLLDHSLQWETFSAILLAHIIKGIVPDIRSDGTVLFKVKAEGGCVHQVQDHDLKGAATLTTFQFP 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0422 358 ProSiteProfiles LOB domain profile. 70 171 IPR004883 -
Glsi07g0422 358 Coils Coil 150 170 - -
Glsi07g0422 358 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 68 218 - -
Glsi07g0422 358 Pfam Lateral organ boundaries (LOB) domain 71 166 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0422 Glsi-ChrGlsi07 3013274 3018974 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0422 70 292 AS2 family AT3G13850 44.583 1.74e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi07g0422 LOB 1e-35 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0377 06 3085794 3092276 Glsi07g0422 07 3013274 3018974 CCT