Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0418 ATGGCTCTGCAGCTGATTTTCCTGCTAATTAAGCTACATTTAGTTATCAGTACCACAAACCTTCATATATATGCAGCCAACAAGTCTCCCCATTCTGGAAGCCATACAAGCATTGCTCTTCCACCATCCAAGTCATGTTCTGAAGTTCATGCAAGTATTGCACTTCCACCTTCTAAGTCATTCTCTAAAGCTCCTACAAAGGAATGGACACACCATTCAGTAGATTCTCCAATATCACATCATAAGCATCACTATTCCAGAAGGAAGTCCAGTGAACCAACTCCAGGGCCAACTTACTTGATTCATCCACCTACTCATCATCAAGGCCCTTCTGTCTACCAATCACAACCTCCTTTCTCTTCACCAATGAACTGGAATTTGCCTGCACCTGCACCATCACCTGCAGTTCTATCAGGCCACTTGAATGTGCCCTCTCCTTCACCTAGAATTTCACCTCAAGGTTCATCATTGAGGAAGATGAAGACTCCACCACCAGCACCTGTTTTGGCTCTGCCACCTCCACCTCCTAATAAGGATTGCATGTTGGTGACTTGCTCAGATCCCTTTACATTTACGCCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAACTCTGCCTTAGCATTGCAATATACAAGTTCTTTCCATTGGTTTCAAAGCTAGCTGATGAAATTGCAGCCAGTGTTTTGTTGAATCATAACCAAGTTCGCATTATGGGAGCTGATGAAGCTGGTCAGCAATTAGAGAAAACTACTGTTCTCATTAACTTGGTACCCAAAGGAATAAGATTTGATTATCCAACAGCATTTTTAATATATACAAAATTCTGGCACGGGGAGATTCACACAGATGCTTCGCTCTTTGGTGCCTATGAAGTACTCTATGTTCATTATCCAGGTCTTCCACCATCTCCACCCCTAGCTCCCCCAAGCATTTCTAGTGTAGATGATGGGCCACACTCAGATCGTGACAAAAATGGAACAATTATGAAACCTTTGGGAGTAGATGTACCAAGAAAAAAAGAAGAAGGAAGTGGTAAAAACATGATTTTAATTATCGTGCTGTCATCTTTTACAGCTTTTGTTCTATTCGTTGGAGTTGCATGGCTCTGTCTGATGAAATGTGGCTCGTGTGTTCATGAGCCTGAACAAGTTCCAAATGCAATTTCATCCTCTTCAAAACTATCAGGGGCTGCCAGGTCATTGACTCATAGGAGCATACCAGGTTTTGGATCAATGTCCTTCAGTTCTAGAACTGTAACACATACAGGATCTGCTAAAACTTTTACTTTGAATGACATAGAGAAAGCAACAAATAACTTTGATGTTTCAAGAATATTAGGAGAAGGTGGCTTTGGGCTTGTTTATAAAGGGGTTTTATATGATGGGAGGGATGTGGCTGTGAAGATTCTCAAAAGAGATGATCATCATGGTGGCCGTGAGTTCTTGGCAGAAGTTGAGATGCTTAGCCGCCTGCATCATAGAAATTTAGTTAAATTGATAGGTATATGCATAGAGAAACAGACTCGCTGCCTAATCTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGGTGCTGACAAGGAAACTGATTCACTTGATTGGAATGCACGGATGAAGATTGCACTCGGCGCAGCTCGGGGATTGGCTTATCTGCATGAAGATTCAAATCCATGTGTCATACATCGGGATTTCAAGTCCAGCAACATCTTGTTGGAATATGATTTTACGCCCAAGGTTTCAGATTTTGGATTGGCTAGAACAGCACTGGACGAGGGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGCTACCTAGCTCCAGAATATGCAATGACTGGCCATCTTCTGGTCAAAAGTGACGTTTACAGCTATGGAGTTGTACTCCTTGAGCTCTTAACTGGAAGAAAGCCAGTAGATTTGTCACAACCGCCAGGTCAAGAAAATCTTGTTGGATGGGTTCGTCCACTACTCACAAGTAAGGAGGGTTTACAGACAATCATAGACCCAGTTATAAAGCCCAACATTTCTGTTGATACTGTTGTAAAAGTTGCAGCAATTGCATCAATGTGTGTTCAACCTGAAGTTTCTCAACGTCCATTCATGGGTGAAGTTGTGCAGGCCTTGAAGCTGGTATGCAGTGAGTTTGAGGAAACAAGCGATGTAATATTAACAAGTTCCCATGAAGAGGGTCTTCGAACTGATGTAGATGGACAATTTTCTCGAGTTTCAGGCGAGATAGTGGACTTTTCAGAGTTTCACAAACCCATACCTGGATATCAAACTAGTCATGAAACCAAGGTAGCATTATCAACATCAGAATTTGCTGGTACGTCAAGCCAGGATTTTGAGTCATTCAAGAGACATTCTACTTCAAGGCAGACAGAAAAGGCAGTTCGGGGGGAAATTGAGGAGTTTGTCTAG 2448 0.424 MALQLIFLLIKLHLVISTTNLHIYAANKSPHSGSHTSIALPPSKSCSEVHASIALPPSKSFSKAPTKEWTHHSVDSPISHHKHHYSRRKSSEPTPGPTYLIHPPTHHQGPSVYQSQPPFSSPMNWNLPAPAPSPAVLSGHLNVPSPSPRISPQGSSLRKMKTPPPAPVLALPPPPPNKDCMLVTCSDPFTFTPPGSPCGCVWPLQVKLCLSIAIYKFFPLVSKLADEIAASVLLNHNQVRIMGADEAGQQLEKTTVLINLVPKGIRFDYPTAFLIYTKFWHGEIHTDASLFGAYEVLYVHYPGLPPSPPLAPPSISSVDDGPHSDRDKNGTIMKPLGVDVPRKKEEGSGKNMILIIVLSSFTAFVLFVGVAWLCLMKCGSCVHEPEQVPNAISSSSKLSGAARSLTHRSIPGFGSMSFSSRTVTHTGSAKTFTLNDIEKATNNFDVSRILGEGGFGLVYKGVLYDGRDVAVKILKRDDHHGGREFLAEVEMLSRLHHRNLVKLIGICIEKQTRCLIYELVPNGSVESHLHGADKETDSLDWNARMKIALGAARGLAYLHEDSNPCVIHRDFKSSNILLEYDFTPKVSDFGLARTALDEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDLSQPPGQENLVGWVRPLLTSKEGLQTIIDPVIKPNISVDTVVKVAAIASMCVQPEVSQRPFMGEVVQALKLVCSEFEETSDVILTSSHEEGLRTDVDGQFSRVSGEIVDFSEFHKPIPGYQTSHETKVALSTSEFAGTSSQDFESFKRHSTSRQTEKAVRGEIEEFV 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0418 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 566 578 IPR008271 GO:0004672|GO:0006468
Glsi07g0418 815 Gene3D Phosphorylase Kinase; domain 1 415 519 - -
Glsi07g0418 815 ProSitePatterns Protein kinases ATP-binding region signature. 450 472 IPR017441 GO:0005524
Glsi07g0418 815 SUPERFAMILY Protein kinase-like (PK-like) 423 717 IPR011009 -
Glsi07g0418 815 MobiDBLite consensus disorder prediction 143 164 - -
Glsi07g0418 815 PANTHER OS01G0750732 PROTEIN 172 737 - -
Glsi07g0418 815 CDD STKc_IRAK 450 718 - -
Glsi07g0418 815 ProSiteProfiles Protein kinase domain profile. 444 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0418 815 MobiDBLite consensus disorder prediction 320 336 - -
Glsi07g0418 815 MobiDBLite consensus disorder prediction 65 80 - -
Glsi07g0418 815 MobiDBLite consensus disorder prediction 311 336 - -
Glsi07g0418 815 FunFam Receptor-like serine/threonine-protein kinase ALE2 520 736 - -
Glsi07g0418 815 Gene3D Transferase(Phosphotransferase) domain 1 520 737 - -
Glsi07g0418 815 MobiDBLite consensus disorder prediction 58 119 - -
Glsi07g0418 815 FunFam receptor-like serine/threonine-protein kinase ALE2 417 519 - -
Glsi07g0418 815 MobiDBLite consensus disorder prediction 144 158 - -
Glsi07g0418 815 Pfam Protein tyrosine and serine/threonine kinase 446 717 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0418 Glsi-ChrGlsi07 2988717 2993066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0418 177 800 Receptor kinase-like Gene Family AT5G56890 59.746 0.0 716
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Glsi07g0418 PK_Tyr_Ser-Thr 2.1e-47 CL0016