Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0403 ATGGAACTCTTTGCTGATACCACGCCGCGCATCGCGGAGAACTTTCGGGCCCTTTGCACCGGTGAGAAGGGGACCGGCCGTAGAGGAAAGCCCCTGCACTACAAGGGCTCGAGTTTCCACCGAGTCATCACCGGTCCTGGAACTTTGTCGATGGCCAACGCTGGCCCTGGCACCCATGGATCTCAGTTCCTCATTTGTACTGCGAAGACGGGAGAACTTTCGGGCCCTTTGCAACGGTCACATCGTGGAGGGGATGGATGTGGGCAAGCTTATTTCATAAACCTTTTCTTTGAGGCTCTGGCTTTGACATGGGCAACATTTGTTTCGCCCACCTGTAATCTTATTGCAGCCATCACCTTCATCATGGCCATCACCTGAGCGAAGGCCAAGGTAGTAGGTAACCGTACTATGATAGCGATTGGTGGGGCAACGCTGCTTACCTTCTTCAAAGGGGTAGAGATTGACTTTTGGTCCTTCCACTTCAACCTTCTGCACCCAAATCACTTCACTCTGATCACAGATTGCCAGATGATGAACCTCAAGGCCATTCTCATCTTCCTATTCATCTCCAAGGCGTTTTCTAAGGTTCCAGAGGATGCCATTAAGTGCTCTTCAAACAGAAACTGCACTAACGCAAACTTCTTGGGAACTTTCCCTGATCGAAGCGCATGTCCAGCATCCGAAGTAATGTTCCCAACCACAGAGGAAGAGCTTATTTCCATAGTGGCATCAGCAACCAGAAGCAACAGGAAGATGAAAGCTGCTTCTCGCTTCTACCACAGCATCCCCAAGCTGGTTTGCCCTGATACCCAAAATGGCCTCTTAATAAGCACCAAGAATCTGAACCAAATTCTGAAGATTGATGTGGAAGCAAGAACCATGACGGTGCAGAGTGGTGCGACTGTGAGAGAGGTGATCGCCGAGGCTGCAAAGAAGGGGTTGGCATTGCCACATACGCCGTATTGGTGGGGCGTAACCATTGGTGGGGTAGTAGCCACGGGTGCTCATGGAACCTCATTGTGGGGAAAGGGAGGTGCTGTTCATGAACGCGTGGTGGAGCTTCGAATTGTTAGTCCGGCGGGAGTTGAAGATGGGTATGCTAAGGTTCGGACACTTGGTGAATCTGATGAAGACCTTAATGCAGCCAAGGTTTCACTTGGTGTTCTTGGCGTTATTTCTCAGATTACCCTGAAATTAGAACCCCTGTTCAAGCGATCTGTGACATTTATAACAAAGAATGATTCAGACTTGGGAGATAAAGTAATTAGTTTTGGAGAAAAGCACGAGTTTGGTGATATAACATGGTACCCAAGTCAACGCGAGGCTGTCTATAGAGTTGATCACCGTGTCTCAATAAATATGTCTGGTAATGGTACATATGATTTCCTCCCATTCCGCCCCCAACTTCCGTCCGAATTAATGGCTCAGAGAGTAACAGAGGAAGAACTAGAAGCCACAGGATATGCTTATGGCAAGTGCATCCAAGCAAAGGCGGTGACTACGATACTCAAGAATAATGCATACGGATTGACTAACAGTGGTAAAACCTTTTCTGGGTATCCTGTAATTGGATTTAGCAACCAGTTGCAGTCATCAGGGACATGCCTAACTAGCACTGAGGATGATGATATAGATAACAGGGTGTGTCCATGGGACTCCAGGTTCAACGGAAATTTCTTTCACCAAACTACATTTAGCATTCCCTTATCTGCAGTAAAAAGTTTCATTGAAGATGTGCAGAAGCTAGTTGAATTGAAGCCACATGCACTTTGCGGCTTAGAACTCTACAACGGAATTATCATTCGCTACGTCAAGGCTTCAAGTGCTTACCTAGGAAAGACACAGGACGGTGTAGAGTTTGACATCACCTACTACCGAAGCAAAGACCCATTATTGCCTAGGCTTCACCAAGACATTTTTGAAGAGATAGAGCAGCTTGGGGTGTTCAAATATGGAGGGTTACCCCACTGGGGGAAGAACAGGAACATAGCCTTTGATGGGGTAATAAGGAAGTACCATAATGCAGGGAAGTTTTTGAGGGTTAAGGAGGTTTATGATTCACAAGGGCTTTTCTCCAGTGAGTGGACAGACCAAGTGCTTGGACTCAAAGAAGGGGTGACAATGTTGAAGGATGGGTGTGCATTGGAGGGTTTGTGTATATGCTCACAGCACAGTCACTGTGCACCTAGCAAAGGGTACTTCTGCAGATCTGGGAGAGTTTATAAGGAAGCTAGGGTTTGTGCTCTCCAGGATCCCGCATTGGAACAAGCAACTAATTTAAAAGATGATATATGA 2295 0.471 MELFADTTPRIAENFRALCTGEKGTGRRGKPLHYKGSSFHRVITGPGTLSMANAGPGTHGSQFLICTAKTGELSGPLQRSHRGGDGCGQAYFINLFFEALALTWATFVSPTCNLIAAITFIMAITXAKAKVVGNRTMIAIGGATLLTFFKGVEIDFWSFHFNLLHPNHFTLITDCQMMNLKAILIFLFISKAFSKVPEDAIKCSSNRNCTNANFLGTFPDRSACPASEVMFPTTEEELISIVASATRSNRKMKAASRFYHSIPKLVCPDTQNGLLISTKNLNQILKIDVEARTMTVQSGATVREVIAEAAKKGLALPHTPYWWGVTIGGVVATGAHGTSLWGKGGAVHERVVELRIVSPAGVEDGYAKVRTLGESDEDLNAAKVSLGVLGVISQITLKLEPLFKRSVTFITKNDSDLGDKVISFGEKHEFGDITWYPSQREAVYRVDHRVSINMSGNGTYDFLPFRPQLPSELMAQRVTEEELEATGYAYGKCIQAKAVTTILKNNAYGLTNSGKTFSGYPVIGFSNQLQSSGTCLTSTEDDDIDNRVCPWDSRFNGNFFHQTTFSIPLSAVKSFIEDVQKLVELKPHALCGLELYNGIIIRYVKASSAYLGKTQDGVEFDITYYRSKDPLLPRLHQDIFEEIEQLGVFKYGGLPHWGKNRNIAFDGVIRKYHNAGKFLRVKEVYDSQGLFSSEWTDQVLGLKEGVTMLKDGCALEGLCICSQHSHCAPSKGYFCRSGRVYKEARVCALQDPALEQATNLKDDI 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0403 764 Gene3D - 561 662 - -
Glsi07g0403 764 Pfam FAD binding domain 229 361 IPR006094 GO:0050660
Glsi07g0403 764 ProSiteProfiles PCMH-type FAD-binding domain profile. 222 402 IPR016166 GO:0071949
Glsi07g0403 764 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 177 IPR002130 GO:0000413|GO:0003755
Glsi07g0403 764 FunFam L-gulonolactone oxidase 5 283 401 - -
Glsi07g0403 764 SUPERFAMILY FAD-binding/transporter-associated domain-like 217 401 IPR036318 GO:0050660
Glsi07g0403 764 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 44 IPR002130 GO:0000413|GO:0003755
Glsi07g0403 764 SUPERFAMILY Cyclophilin-like 1 75 IPR029000 -
Glsi07g0403 764 NCBIfam FAD-dependent oxidoreductase 197 747 IPR010030 -
Glsi07g0403 764 Gene3D - 283 401 IPR016169 -
Glsi07g0403 764 Pfam D-arabinono-1,4-lactone oxidase 395 698 IPR007173 GO:0003885|GO:0016020
Glsi07g0403 764 Gene3D - 45 79 IPR029000 -
Glsi07g0403 764 PANTHER GULONOLACTONE OXIDASE 195 742 - -
Glsi07g0403 764 Gene3D - 1 44 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0403 Glsi-ChrGlsi07 2845387 2851831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0403 94 158 Nodulin-like Gene Family AT5G13670 44.156 2.45e-08 55.1