Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0401 ATGAAACTCAGCATCATTCCTCAAGAACCAACTCTTTTCAGGGGTAGTGTTCGAACCAACATGGACCCACTAGGCATATTCTCTGATGATGAGATATGGAAGGCTTTAGAGAAGTGTCAGCTCAAGGAGGCAATAAGTTGTCTGCCAAATCTTCTGGACTCATCAGTGAATGATGAAGGCGAAAATTGGAGCGTGGGCCAACGCCAACTCTTTTGCCTAGGAAGAGTTCTTCTACGAAGGAATAGAATTCTTGTCTTGGATGAAGCAACTGCTTCCATTGATACTGCAACAGATGCCATTCTACAAAGAGTAATCAGAGAGGAATTCTCTGGATGCACTGTTATAACTGTGGCTCACAGAGTTCCAACTGTTATAGACAGTGACATGGTCATGGTTCTTTCTTATGGCAAAATGGTGGAGTATGATGAACCATCAAAGCTTATTGAGGATAGTTCTTCTTCATTCTCTAAGCTCGTAGCCGAATACTGGTCTACCAGCAGAAGGAACTCTTTTTAA 516 0.4244 MKLSIIPQEPTLFRGSVRTNMDPLGIFSDDEIWKALEKCQLKEAISCLPNLLDSSVNDEGENWSVGQRQLFCLGRVLLRRNRILVLDEATASIDTATDAILQRVIREEFSGCTVITVAHRVPTVIDSDMVMVLSYGKMVEYDEPSKLIEDSSSSFSKLVAEYWSTSRRNSF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0401 171 FunFam AGAP012735-PA 41 164 - -
Glsi07g0401 171 Pfam ABC transporter 2 91 IPR003439 GO:0005524
Glsi07g0401 171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 152 IPR027417 -
Glsi07g0401 171 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 166 - -
Glsi07g0401 171 Gene3D - 1 162 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0401 Glsi-ChrGlsi07 2832812 2833840 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0401 2 159 Calmodulin-binding Proteins AT2G36910 30.435 1.74e-18 80.1