Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0389 ATGCACAGTTTGCAGCACCACTTGTTCTGCCATGAAGGTGGAATCTTTTGTACAATTTCAAGATATTTTCATGTAGAACTGGTAGTAGTTCAATCATCTGAGGCTTCTCTTGGCTATGTAAATAATGTAACATTAGCTGCTGAAGTGTGCGGAGAAATGGCCACAGTACCAGGGCAGCTCGTATGGGAGATCGTGAAAAGGAATAACTCGTTTTTGGTGAAGGAGTTTGGAAGGGGGACTCAGAGCGTGCAGTTTAGCAAAGAGAGCAACAATCTATATAACCTTAACTCTTTCAAGTTTTCTGGTTTGGCAAACAAGAAAACCGTTACGATTCAGCCTGGCGGTAAAGATCAATCTGTGTTGCTGGCAACGACCAAGACAAAGAAACAGAACAAGCCTGCTGGTTTGCTTCACAAATCTGTCATGAAAAAGGAGTTCAAAAGAATGGCAAAGGCAGTGGAGAACCAGGTGGCAAATAACTACTACAGGCCTGATCTCAAGAAGGCAGCCCTTGCAAGGTTGAGTGCCATTAACAGGAGCCTTAAAGTTGCCAAGTCTGGTGTCAAGAAGAGGAATAGACAGGCTGTGAAGGTCCGTGGTAGGAATTGA 609 0.4401 MHSLQHHLFCHEGGIFCTISRYFHVELVVVQSSEASLGYVNNVTLAAEVCGEMATVPGQLVWEIVKRNNSFLVKEFGRGTQSVQFSKESNNLYNLNSFKFSGLANKKTVTIQPGGKDQSVLLATTKTKKQNKPAGLLHKSVMKKEFKRMAKAVENQVANNYYRPDLKKAALARLSAINRSLKVAKSGVKKRNRQAVKVRGRN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0389 202 PANTHER 60S RIBOSOMAL PROTEIN L28 53 201 IPR002672 GO:0003735|GO:0005840|GO:0006412
Glsi07g0389 202 Gene3D - 58 185 - -
Glsi07g0389 202 FunFam 60S ribosomal protein L28 57 185 - -
Glsi07g0389 202 Pfam Ribosomal L28e protein family 60 180 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0389 Glsi-ChrGlsi07 2727070 2730885 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0389 53 195 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 75.524 1.31e-75 222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g0345 06 2830602 2833293 Glsi07g0389 07 2727070 2730885 CCT
Glsi07g0389 07 2727070 2730885 Glsi06g0345 06 2830602 2833293 ECH
Glsi07g0389 07 2727070 2730885 Glsi07g0389 07 2727070 2730885 ECH