Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0380 ATGGCAGGAAATTTCCTATTTGCAGTGTTTCAATTTTCTTTGATTCTTGCAGTCCTTGTTCATGCCCAGAATCCATCAGGATTCATTAGTATTGACTGCGGACTTATGGATGAACCAAGCTACACAGATGAAACTACTTCCATCTATTATACTTCAGATGCGAACTTCATTATCACCGGTGTTAGCCGCAGCATATCATCCAAACACAAGGCTGAAACCCTTAACAGGCAGTTCTGGAATGTGAGAAGCTTCCCAGAAGGAACTAGGAACTGCTATACCCTTAGTGCTCCCCAAGGAAGTAACAGGAAGTATTTAGTCAGGGCCAGATTCATGTACGGAAACTATGATGGTAAAAAGTCTCTTCCCAAATTTGACATCTATCTTGGAACCAAATGGTGGGACTCGGTGGACTTTGAGAATGCATCCAGTGTAATAACCAAGGAAATCATTTACGTTGCTTCATCAGATTACATACATGTTTGCCTTTATAACACCAACAATGGTGCACCTTTTATATCAGTTTTGGAGCTTAGAGTTCTTAACAGTGATGCCTATCTAATTAGCTCTTTGGAGCTCTTAGCACGGTTTGATTTAGGCTTGCAGGATGGTAAATTAGTCAGATACCCGGATGATGCCTATGATCGGATATGGACACCTTATAACTCAGGTGACTGGAAACACATAAATACCTCACTCCCTGTAGACCAAGGAACATCATCATACAGTTTTTTACCTTTACCGCCATCCATTGTCATGAGGACAGCAGTTACTCCAGCAAATATCAGCAAAAATATAGAAATTGACTTTCTTCCCAGGCATAATGCCTCTACATATTATGCATACATGTACTTTGCTGAAACCCAGAAGCTCCAAGCATATCAAAGTAGAGAATTTAACATTTTCGTGAATGGGGACCATTTTAATGCTGATCCAGTCAGTCCTTTGTACCTACAGAGCTTGTATTATATCGCTGCAATTAGTGAACCTCGGTTGGATATTTGGATTAATAAAACTAGTAGATCAACTCTTCCACCTCTTTTCAATGCCATTGAGATATATATGACTAAGGACCTCTTACAATCAGAAACAGAACAAACAGATGTTGATGCTATCATGAACGTCAAGTCAATTTATGGGATTAAGAGAAATTGGCAAGGAGATCCTTGTACTCCACTGGCTTACTTGTGGGATGGTCTTAACTGCAGCTATGATGGATCTGGCGCACGAAGGATAATATTCTTGAACTTATCCTCTAGTGGATTAATTGGAAATATAGTCCCTGACATATCCAATCTGAAGTTTATGGAGTATTTGGATCTGTCAAACAATAGTTTGATTGGGGATATACCGAGTTTCCTATCTCAACTGCGCTTTTTGAGGGTTCTAAACTTAGAAGGAAATCAGCTGTCAGGAGCAATTCCAACAAAACTCATTGAGAAGTCAAAGAATGAAACACTTAAATTCAGTTTTGGGAGAAATCCAAATCTTTGCTCTCCAGGTTCATGCAAGAGGAGTAAGGCAAAGATTGTCATTCCAATAATGGCATCACTAGGTGGAGCTTTCATGTTACTGGCAGCCACAATTATTTTCTGCATCTTCAAAAGAAGACAGCCAGTTTCCATCCATCCAAACAAGCTGTACTCATACTCGAAAATAAGTAAGGAGCTAGAGTCAAAGAAACAATTCACGTATGCTGATGTTTTGAGCATTACCAACAACTTTGGAAAGCTTGTGGGGAAAGGGGCATTTGGAACAGTATACCATGGCTTCTTAGGTAATACTGAGGTAGCTGTCAAAATGCTCTCTCCTTCAGCTCAAGGATATCTGCAATTTCTGGCAGAGGCCAAACTCCTTGCCAGAGTTCACCATAAATGCTTGACTCCTCTTATTGGGTATTGCAATGATGGCACCAATTCGGCTCTCATCTATGAATATATGGCTAATGGAGACTTAGCAGAGCATTTATCAGATAAAAATGAAAATATCTTGGATTGGAAACATCGACTTCAAATTGCAGTGGATGCTGCGGAAGGCTTGGAGTATATGCATAAGGGTTGTAAGCCACCAATTGTTCACAGAGATGTTAAATCTAGGAACATCTTACTGAATGAAAAATTCCGGGGTAAAATAGCCGATTTTGGTTTGTCAAAGATCTTCCCTGATGAAACTTACACCCATATGTCCACAGTGATTGCCGGCACCCCAGGCTACCTTGACCCAGAATACAATATATCAAACAGGTTGAATGAAAAAAGTGATGTTTTCAGCTTTGGGGTAGTTTTGCTTGAGATAATCACAGGTCGACCTGCTATAGCCAAGACTGAAGAGAGAACTCACATAATCCAATGGCTTAATTCCATGCTACCTGAAAGAGATATTAATGATGTTGTGGATTCAAGATTACAGGGGGAATTTGACGCTGATTCTGCAAGGAAAGCCTTAGATACTGCAAGGGCTTGTGTGGCACTCGCTTCCCTTAATAGGCCAACCATGAGCCAGGTTGTGATGGAATTGAGACAATGTTTGGCAATGGAGACCAACCGTGCACCTGACAGCTCAAATGATTTCTCCTTTGATGGAATTAGTGGAGAGAGTTCTCTAGAAAGATAG 2610 0.4046 MAGNFLFAVFQFSLILAVLVHAQNPSGFISIDCGLMDEPSYTDETTSIYYTSDANFIITGVSRSISSKHKAETLNRQFWNVRSFPEGTRNCYTLSAPQGSNRKYLVRARFMYGNYDGKKSLPKFDIYLGTKWWDSVDFENASSVITKEIIYVASSDYIHVCLYNTNNGAPFISVLELRVLNSDAYLISSLELLARFDLGLQDGKLVRYPDDAYDRIWTPYNSGDWKHINTSLPVDQGTSSYSFLPLPPSIVMRTAVTPANISKNIEIDFLPRHNASTYYAYMYFAETQKLQAYQSREFNIFVNGDHFNADPVSPLYLQSLYYIAAISEPRLDIWINKTSRSTLPPLFNAIEIYMTKDLLQSETEQTDVDAIMNVKSIYGIKRNWQGDPCTPLAYLWDGLNCSYDGSGARRIIFLNLSSSGLIGNIVPDISNLKFMEYLDLSNNSLIGDIPSFLSQLRFLRVLNLEGNQLSGAIPTKLIEKSKNETLKFSFGRNPNLCSPGSCKRSKAKIVIPIMASLGGAFMLLAATIIFCIFKRRQPVSIHPNKLYSYSKISKELESKKQFTYADVLSITNNFGKLVGKGAFGTVYHGFLGNTEVAVKMLSPSAQGYLQFLAEAKLLARVHHKCLTPLIGYCNDGTNSALIYEYMANGDLAEHLSDKNENILDWKHRLQIAVDAAEGLEYMHKGCKPPIVHRDVKSRNILLNEKFRGKIADFGLSKIFPDETYTHMSTVIAGTPGYLDPEYNISNRLNEKSDVFSFGVVLLEIITGRPAIAKTEERTHIIQWLNSMLPERDINDVVDSRLQGEFDADSARKALDTARACVALASLNRPTMSQVVMELRQCLAMETNRAPDSSNDFSFDGISGESSLER 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0380 869 PANTHER OS07G0107800 PROTEIN-RELATED 29 842 - -
Glsi07g0380 869 ProSiteProfiles Protein kinase domain profile. 572 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0380 869 FunFam Leucine-rich repeat receptor-like kinase 366 499 - -
Glsi07g0380 869 SUPERFAMILY L domain-like 373 478 - -
Glsi07g0380 869 Gene3D Ribonuclease Inhibitor 368 488 IPR032675 -
Glsi07g0380 869 Pfam Protein tyrosine and serine/threonine kinase 574 838 IPR001245 GO:0004672|GO:0006468
Glsi07g0380 869 Pfam Malectin-like domain 31 354 IPR024788 -
Glsi07g0380 869 ProSitePatterns Protein kinases ATP-binding region signature. 578 599 IPR017441 GO:0005524
Glsi07g0380 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 690 702 IPR008271 GO:0004672|GO:0006468
Glsi07g0380 869 SUPERFAMILY Protein kinase-like (PK-like) 548 838 IPR011009 -
Glsi07g0380 869 Gene3D Phosphorylase Kinase; domain 1 554 645 - -
Glsi07g0380 869 Gene3D Transferase(Phosphotransferase) domain 1 646 861 - -
Glsi07g0380 869 SMART serkin_6 572 842 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0380 869 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 646 850 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0380 Glsi-ChrGlsi07 2659189 2664479 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0380 12 843 Receptor kinase-like Gene Family AT2G19210 47.692 0.0 791
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Glsi07g0380 Malectin_like 2e-102 CL0202