Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0377 ATGGATGGCCGATGGGGTGGAGGTGGGGCGGTCGTGGTGGCAGCGGCGACTGTGGGGCACTGGGTCAACGGTCTAGGTGGGGCAAAGGCATGGCGCTTTCTCATCCAAGTGCTTGATGTTGTGACACCTCCTTATACAGAAGCTTGGTGTCGTGACATTAATTGTGGTTCTCTTCATAGTGCTAATAAGGTTCTCTCCTTTTGGTTTCCAACTCCAAATCTTAAGGAGAAAGCAGCAATGACTGGGAGTCTACAACTAAAGTTGTTGATTTTAGAGCGAAAAATGCAAAAACAAATCCTTTTAGCAATAGATGCAGCACAAGAGAATTTCCAGGCAAAGCTTGCAGATTTTGGGTTGTCAAAATCTTTAGCAATTGATACTAGTTCTTACGTTACAACTAGAGTTTATGGAACCCCAGGTTATCTTGATCCAGAGGTACGTAGTTCTGGAAATTCATATACTATGAAAGCCCTTTGCCTCTATCAATGTGGTGATGCAAAACATCAACGTCTGTTTCATTCAATTAGATGTATCACGGACAGCACCTTTTCTTGTATAAGTAACAATATGTCACTCACGTTCGTCTTCCTAAGCTGGAAGGAAAATGCAGAAGGTGTTGGGAATGTCTCAGAGTATCTTCTTTTCTTTTCTGGGTTGTCTGGTGATTCTTACAGTTCTGGTTCAAGCTCAGGATCAATCAGCATAGATTGTGGGCTACCTGCAAAGTCCAGCTATACTGAGAAGACAACAAGCATAAACTACATTTCAGATGCCAAGTTCATAAATTCTGGTGAGAGCTGGACCATAACATCTGATCTCAAAAGTGTCTACCAACAACAACTGTGGACTTTAAAGGTTACAACTTATATCACTGAATTTGGATCATTGTCACTCTACGCGAGGTTGGATTTAGGTTCAATCACCAACCAAACATACAGGTACAGCGATGATGTTTATGATCGTTTCTGGGATTTAAGTGTCTACAACAAAGAGTGGACGGAATTAAGTGCTCCAATTCCTGCAGATTCCTTAACTCAGAATGATTACGAACCACCAGCAATTGTCATGAGCACCGCATCTACACCAGTAAATTCGAGTGCTCCAATGTCAGTTTCTTGGAACCCAGAGAATGTCACAGACCAATTCTATGTTTACATGCACTTCGCAGAGCTCGAGGTGTTAGCAGAGAATCAGACAAGATCATTCAACATCACCCTAAATGGCAAGCCTTGGTACTCAAATCTTGTACCCAAGTACCAAACCACGGATACTGTATTTACCCAGTCAGCTACCAGTGGAGAAAATATTGAATTTTTACTTGAGAAGACTGAGCATTCAACCCTTCCTCCCATCGTCAACGCCATTGAGATTTTCACAGTTAAAGAATTTTCGCAGTCAGGAACTGATCAAGGAGATGTTGACGCAATTACAAGAATCAAGTCAACTTATGGGGTGACAAGAAATTGGCAAGGAGATCCATGTGGCCCAGTAGCCTATCTGTGGGATGGTCTAAATTGTACTTACAATGGCGAAAATCCTCCTAGAATCATAGCCTTGAGTTTATCTTCAAGTGGATTGACAGGGCAAATAGATTCTTCCATCTCAAAGCTCACCCTGTTGGAGAAGTTGGATTTATCAAACAATAGCTTAACTGGACCAGTGCCTAATTTTCTGTCTCAATTACAAAACCTGAAGATCTTAAACTTGGAGAAGAACAACTTCACAGGTTCAGTTCCCTCTGATTTGGTTCAAAAATCAAACAAAGGTTCCCTTTTACTGAGGTACTATATATCAAACAGATTAACGGAGAAGAGTGATATTTATAGCTTTGGAGTTGTTCTTTTGGAGATAATCACAAGTCAACCAGTGATATCAAGAAATCATGAAAGAGGTCACATAAGTCAATGGATTGGCTCCATAATTTCTAAAGGGGATATCAAGAGCATTGTTGACTCAAGGTTAAGTGGAGACTTTGACAGTAACTCTGCTTGGAAAGCTGTAGAAATAGCAGTGGCTTGTATATCTCAGAACCCCAACAGCAGGCCAAATATGAGTGAGGTAGTGATAGAGCTAAAAGAGTGCTTGGCGTCAGAATTAGCTCGAACCAAACACAGTGGTACTAATACAGGAGATTCAGTTGAACTGGTCACCATGAATATGACTACAGAACTCTCTCCCCTGGCCAGTTTATTAGAAGGAGATCAAAATCTTTCTCAAGCTTCTCGTGTGTTACTATTTGCTGAGAGAAAACTCTGCTACATTGTCAATATGGAGACCAGAAGAATAGAAGAAGCTGAAGGGGACCGAAGCAAAGGAGGGGAAGGCAGAGATGGAAACCAGAAGGCAAACATTGGAATCGGTGCAATACTGGAGACACAACAGAAAGTTGTCAGAGGAAGGTGGCTGGAACAGGGGGCAGATGGCAGAAGTGTCAGCATAGAAGAAACCCATGCAAGAAAGGAAGAAGGCAGAGAATGTGAAAGCAAAGGAAAAGAACATAATGAGACTTTTGGAAGGAGTACAGAAGGAACTGAGAGGAGGAGACAAGGGAGCGTATGGCAGCAGAGGGATGAGATAGGGAAAAGATCAGAGTGGAAAAGCGCAACACCTGACACAGAAACCAAAAGGATGAGCTGTATAGAAGTGACTGGGGAAACAAGTGGGACAGAAGGAGGGACTGAAAGCGTTAAAAGCCCAATAGAACTGAATGGACCTCAAAAATTTGCTGAGATATCAATAAGAGAAAGCAGACAAATGGAACCTAAAATAATGGGCCCATACATGGAGTGGATGAAAGGAACAAAAGCCCAAAAGGACGCAGGCCAGGATTTAAACAAGGAAAATGACCCAAAGAGACAAGTAAGGCAAATACAGACAAAAAGAACAAGTGTAGAAACTATGGATACTGATGATGGCAGAGCAAGAGGGGAAAAGTACATCACTATGAAGAGGAACAAGAGTGAAAAGGAAAAGTTGTTCTATCATCACTTGACCTTTTCTTCTAAACTCTTAGTTCCAAAAGGTGATGGGAATGTCTCAGAGTATCTTCTTTTCTTTTCTGGGTTGTCTGGTAATTCTTACAGTTCTGGTTCAAGCTCTGGATCAATCAGCATAGATTGTGGGCTACCTGCAAAGTCCAGCTATACTGAGAAGACAACAAGCATAAACTACATTTCAGATGCCAAGTTCATAAATTCTGGTTCTGGAACACCATTTATCTCAGCTATAGAAATAAGGACTTTAATGAATGATACTTATGTCACTGATTTTGGATCATTGTCACTCTACTCGAGGTACAGCGATGATGTTTATGATCGTTTCTGGGATTACAGTGCCTACTACAAAGATTGGACGGAATTAAGTGCTTCAATTCCTGCAGATTCCTTAACTCAGAACGTTTACGAACCACCAGCAATTGTCATGAGCACTGCAGCCACACCAGTAAATGTGAGTGCGCCAATGTCAGTTTGGTGGGCCCCAGAGGATGTCAAAGACCAATTCTATGTTTACATGCACTTCGCAGAGCTCGAGGTGTTAGCAGAGAATCAGACAAGATCATTCAACATCACCCTAAATGGCAAGCCTTGGTACTCAAATCTTGTACCCAAGTACCAAACCACGGATACTGTATTTACCCAGTCAGCTACCAGTGGAGAAAATATTGAATTTTTACTTGAGAAGACTGAGCATTCAACCCTTCCTCCCATCGTCAACGCCATTGAGATTTTCACAGTTAAAGAATTTTCGCAGGATTTATCAAACAATAGCTTAACTGGACCACTGCCTGATTTTCTGTCTCAATTACAAAACTTGAAGATCTTAAACTTTGAGAACAACAACTTCACAGGTTCAGTTCCCTCTGACTTGGTTCAAAAATCAAAGAAAGGTTCCCTCTCACTAAGGTACTATATATCAAACAGATTAACGGAGAAGACTGATATTTATAGCTTTGGAGTTGTTCTTTTGGAGATAATCACAAGTCAACCAGTGATATCAAGAAATCATGAGAGAGGTCACATAAGTCAATGGGTTGGCTCCGTAATTGCTAAAGGGGATATCAAGAGCATTGTTGACTCAAGGTTAAGTGGAGACTTCGACAGTAACTCAGCTTGGAAAGCTGTAGAAATAGCAATGGCTTGTGTATCTCCAAATCCTAACAGCAGGCCAATTATGAACGAGGTAGTGATAGAGCTAAAAGAGTGTTTGGCGACAGAATTAGCTCGAACCAAACACAGTGGTACTAATACAGGAGATTCAGTTGAACTGGTCACCATGAATATGACTACAGAACTCTCTCCCCTGGCCAGTTACTATATACTCATCAATTCTGTGTGTGATTGCTTAAGTGTGCCTGACAGAGGATATTGCAACAATAAGATATATGCCGTTTACCCTATTCATCATCAAAAGTGGGAAGATTACTTTCTCTGGTGTTTACTTTTGGGAATGTTACATCCCTTTCTTAATGCATTGCTTGGAGTTCTAAGTATAACTATTGGGGTTGCGGTTCAAGCCCAGGATCAATCAGGATTCATCAGCATAGATTGTGGGCTACCAGCAAATTCCAGCTATACTGAGGAAACCACGGGAATAAACTACATTTCAGATGCAAAGTTCATTGATACTGGACAAAGAAACTGCTATAGAGTTAATGTCGCAAGTGAAACTAAGTATTTAATCAGAGCTATATTCCTTTATGGAAACTATGATGGTCTAAATGAGCTACCAGAATTTGATCTTCATCTTGGAACTGATCTGTGGGAGACACTGAAGTTCACCAATGTCTCACTTAGCAAAATCAGTGAGATCATTCACACCCCATCACTGGATTACATTCATGTCTGTCTAGTTAACACAGGCTCTGGGACACCATTCGTTTCAGCTCTAGAATTGAGGACTTTGAAAAACAATGCTTATGACACTCAATCTGGGTCACTGTCTCGATTCCTTCGGTTTGATTTCGGATCCATCACCAACAAAACATACAGGTACAAAGATGATGTTTATGACCGTTTCTGGGCGCCTATTTCCTACAACCTGTGGACACATATAAGCACAACACTTAGTGATGATTCTCTAGTTCAGAATAATTATAAACCACCAGCAGTTGTCATGAGCACTGCAGCTACACCCATAAATGTTAGTGCTTCTTTTGATATCTACTGGGATTCAGTTAATGAAAGGGAACAATATTACATCTACCTGCACTTTAATGAGACAACAACTACCATATACAGTTCATCAGCTTTGACAGGATCAACACGATATCTATTTTCACTTTTTCAGACTGAGAATTCAACCCTTCCACCTATTCTCAATGCTGTTGAGGTTTACACTGTAAAAGATTTCTCACAATCAGGAACTAACCAAGATGATGTTCCTAAAATAATTGGAAATGCAATCAGGAATTTGTCTTCAAGTGGACTGATGGGGGAGATTGCATCTTACATCTCTAACCTCACCATGTTGGAGTACTTGGACTTATCAAACAATAGCTTGAGTGGAACAGTTCCTGTTTTTCTCACAAAATTGCAGTCACTGAAAGTCTTAAACTTGGAGAATAACAACCTGACAGGTTTAGTTCCCAGTGAACTTGTTGACAGATCAAAGAAAGGTTCACTATCATTGAGTGTGGGGCAAAATCCAAATCTATGTGAATCTGCCTCATGCAACCCAGTGGAGAATAAGGAGGAGAGGAAGAAGAAAACTAATATTGTTATTCCCGTGGTAGCATCAGTTGCTGGGCTTTTGGTTCTCATACTGATTATAGTACCAGCTATCTTCTATTTCTGTGGCCCTAAAACAGGAAAACCCAATGGTCAAACTTCTTTTGAGAGTTCATCATAG 5847 0.4088 MDGRWGGGGAVVVAAATVGHWVNGLGGAKAWRFLIQVLDVVTPPYTEAWCRDINCGSLHSANKVLSFWFPTPNLKEKAAMTGSLQLKLLILERKMQKQILLAIDAAQENFQAKLADFGLSKSLAIDTSSYVTTRVYGTPGYLDPEVRSSGNSYTMKALCLYQCGDAKHQRLFHSIRCITDSTFSCISNNMSLTFVFLSWKENAEGVGNVSEYLLFFSGLSGDSYSSGSSSGSISIDCGLPAKSSYTEKTTSINYISDAKFINSGESWTITSDLKSVYQQQLWTLKVTTYITEFGSLSLYARLDLGSITNQTYRYSDDVYDRFWDLSVYNKEWTELSAPIPADSLTQNDYEPPAIVMSTASTPVNSSAPMSVSWNPENVTDQFYVYMHFAELEVLAENQTRSFNITLNGKPWYSNLVPKYQTTDTVFTQSATSGENIEFLLEKTEHSTLPPIVNAIEIFTVKEFSQSGTDQGDVDAITRIKSTYGVTRNWQGDPCGPVAYLWDGLNCTYNGENPPRIIALSLSSSGLTGQIDSSISKLTLLEKLDLSNNSLTGPVPNFLSQLQNLKILNLEKNNFTGSVPSDLVQKSNKGSLLLRYYISNRLTEKSDIYSFGVVLLEIITSQPVISRNHERGHISQWIGSIISKGDIKSIVDSRLSGDFDSNSAWKAVEIAVACISQNPNSRPNMSEVVIELKECLASELARTKHSGTNTGDSVELVTMNMTTELSPLASLLEGDQNLSQASRVLLFAERKLCYIVNMETRRIEEAEGDRSKGGEGRDGNQKANIGIGAILETQQKVVRGRWLEQGADGRSVSIEETHARKEEGRECESKGKEHNETFGRSTEGTERRRQGSVWQQRDEIGKRSEWKSATPDTETKRMSCIEVTGETSGTEGGTESVKSPIELNGPQKFAEISIRESRQMEPKIMGPYMEWMKGTKAQKDAGQDLNKENDPKRQVRQIQTKRTSVETMDTDDGRARGEKYITMKRNKSEKEKLFYHHLTFSSKLLVPKGDGNVSEYLLFFSGLSGNSYSSGSSSGSISIDCGLPAKSSYTEKTTSINYISDAKFINSGSGTPFISAIEIRTLMNDTYVTDFGSLSLYSRYSDDVYDRFWDYSAYYKDWTELSASIPADSLTQNVYEPPAIVMSTAATPVNVSAPMSVWWAPEDVKDQFYVYMHFAELEVLAENQTRSFNITLNGKPWYSNLVPKYQTTDTVFTQSATSGENIEFLLEKTEHSTLPPIVNAIEIFTVKEFSQDLSNNSLTGPLPDFLSQLQNLKILNFENNNFTGSVPSDLVQKSKKGSLSLRYYISNRLTEKTDIYSFGVVLLEIITSQPVISRNHERGHISQWVGSVIAKGDIKSIVDSRLSGDFDSNSAWKAVEIAMACVSPNPNSRPIMNEVVIELKECLATELARTKHSGTNTGDSVELVTMNMTTELSPLASYYILINSVCDCLSVPDRGYCNNKIYAVYPIHHQKWEDYFLWCLLLGMLHPFLNALLGVLSITIGVAVQAQDQSGFISIDCGLPANSSYTEETTGINYISDAKFIDTGQRNCYRVNVASETKYLIRAIFLYGNYDGLNELPEFDLHLGTDLWETLKFTNVSLSKISEIIHTPSLDYIHVCLVNTGSGTPFVSALELRTLKNNAYDTQSGSLSRFLRFDFGSITNKTYRYKDDVYDRFWAPISYNLWTHISTTLSDDSLVQNNYKPPAVVMSTAATPINVSASFDIYWDSVNEREQYYIYLHFNETTTTIYSSSALTGSTRYLFSLFQTENSTLPPILNAVEVYTVKDFSQSGTNQDDVPKIIGNAIRNLSSSGLMGEIASYISNLTMLEYLDLSNNSLSGTVPVFLTKLQSLKVLNLENNNLTGLVPSELVDRSKKGSLSLSVGQNPNLCESASCNPVENKEERKKKTNIVIPVVASVAGLLVLILIIVPAIFYFCGPKTGKPNGQTSFESSS 1948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0377 1948 MobiDBLite consensus disorder prediction 810 871 - -
Glsi07g0377 1948 Pfam Protein tyrosine and serine/threonine kinase 599 690 IPR001245 GO:0004672|GO:0006468
Glsi07g0377 1948 SUPERFAMILY L domain-like 486 587 - -
Glsi07g0377 1948 Pfam Malectin-like domain 1066 1245 IPR024788 -
Glsi07g0377 1948 Pfam Malectin-like domain 283 460 IPR024788 -
Glsi07g0377 1948 Pfam Malectin-like domain 1542 1743 IPR024788 -
Glsi07g0377 1948 SUPERFAMILY Protein kinase-like (PK-like) 98 156 IPR011009 -
Glsi07g0377 1948 Gene3D Transferase(Phosphotransferase) domain 1 1296 1403 - -
Glsi07g0377 1948 PRINTS Leucine-rich repeat signature 1823 1836 - -
Glsi07g0377 1948 PRINTS Leucine-rich repeat signature 1844 1857 - -
Glsi07g0377 1948 FunFam Leucine-rich repeat receptor-like kinase 471 594 - -
Glsi07g0377 1948 Gene3D Transferase(Phosphotransferase) domain 1 591 715 - -
Glsi07g0377 1948 SUPERFAMILY L domain-like 1251 1877 - -
Glsi07g0377 1948 MobiDBLite consensus disorder prediction 808 875 - -
Glsi07g0377 1948 Gene3D Transferase(Phosphotransferase) domain 1 96 158 - -
Glsi07g0377 1948 Gene3D Ribonuclease Inhibitor 1731 1902 IPR032675 -
Glsi07g0377 1948 Pfam Leucine Rich Repeat 540 560 IPR001611 GO:0005515
Glsi07g0377 1948 Pfam Leucine Rich Repeat 1846 1864 IPR001611 GO:0005515
Glsi07g0377 1948 Gene3D Ribonuclease Inhibitor 1240 1295 IPR032675 -
Glsi07g0377 1948 Gene3D Ribonuclease Inhibitor 474 590 IPR032675 -
Glsi07g0377 1948 SUPERFAMILY Protein kinase-like (PK-like) 1306 1406 IPR011009 -
Glsi07g0377 1948 PANTHER OS07G0107800 PROTEIN-RELATED 1251 1299 - -
Glsi07g0377 1948 SMART LRR_typ_2 1844 1867 IPR003591 -
Glsi07g0377 1948 SMART LRR_typ_2 1268 1292 IPR003591 -
Glsi07g0377 1948 SMART LRR_typ_2 537 560 IPR003591 -
Glsi07g0377 1948 SMART LRR_typ_2 561 585 IPR003591 -
Glsi07g0377 1948 SMART LRR_typ_2 1820 1843 IPR003591 -
Glsi07g0377 1948 SUPERFAMILY Protein kinase-like (PK-like) 599 700 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0377 Glsi-ChrGlsi07 2597446 2639008 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0377 589 728 Receptor kinase-like Gene Family AT2G19210 43.750 1.86e-25 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Glsi07g0377 Malectin_like 3.7e-68 CL0202