Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0375 ATGTCACTCACGTTCGTCTTCCTAAGCTTCAAGGAAACTGCACAAGGTGATGGGAACGTCTCAGAGTATCTTCTTTTCTTTTCTGGGTTGTCTGGTAATTCTTACAGTTCTGGTTCAAGCTCAGGATCAATCAGCATAGATTGTGGGCTACCTGCACAGCCCAGCTACACCGAGAGCACAACAGGCATAAACTACGTTTCAAATGCCAAGTTCATAAGTTCTGGTGAGAGCAAGACCATAGCATCTAATCTCAAAAGTGCCTACCAACGACAGCTATGGTACAGCACAGATGTTTTTGATCGTTTCTGGAATTACAATGTCTACAACAAAGATTGGACGGAATTAAGTGCTTCAATTCCTGCAGATTCCTTAGCTCAGAACGATTACAAACCACCAGCAATTGTCATGAGCACTGCAGCCACACCAGTAAATGTGAGTGAACCAATGTTAGTTTGGTGGGACCCAGAGAATGTCACAGACCAATTCTATGTTTACATGCACTTCGCAGAGCTCGAGGTGTTAGCAGAGAATCAGACGAGATCATTCAACATCACCCTAAATGGCAAGCCATGGTACTCAAATCTTGTACCCGAGTACCGATCCACGGGTACTGCATTTACCGAGTCAGCTATCGGTGGAGAAAGGATTCAATTTTTACTTGAGAAGACTGAGCATTCAACCCTTCCTCCCATCATCAACGCCCTTGAGATTTTCACAGTTAAAGAATTTTCGCAGAGTTTATCTTCAAGTGGATTGACAGGGCACATAGATTCTTCCATCTCAAAGCTCACCCTGTTGGAGAAGTTGGATTTATCAAACAATAGCTTAACTGGACCAGTGCCTGATTTTCTGTCTCAATTACAAAACCTGAAGATCTTAAACTTGGAGAAGAACAACTTCACAGGTTCAGTTCCGTCTGATTTGGTTCAAAAATCAAACAAAGGTTCCCTTTTTCTGAGTATTGACCAAAACCCAAATCTATGTGAATCTGCACGATGCACCAAGGAGGAAAAGAAGAAGAATATTATTGTTCCCTTAGTAGCATCAGTGGGTGGAATTTTGATCCTTCTGCTAGCCATGGCAGCTATATTTTTAACCTTTAAAAAGAGAAAATCAAAAGGATTGGAGTATCTGCACAATGGATGTAAGCCACCTATAATCCACAGAGACGTAAAATCTACAAACATCTTGTTGAATGAAAACTTCAGAGCAAAATTAGCTGATTTTGGTCTATCAAAAATTATCCCAACTGATGAGGGAACTCATGTGTCAACTGTTGTTGCCGGTACTCCTGGTTATCTGGACCCTGAGTTAAGTGGAGACTTTGACAGTAACTCTGCTTGGAAAGCTGTAGAAATAGCAATGGCTTGTGTATCTCCGAACCCCAACAGCAGGCCAAATATGAGTGAGGTAGTGATAGAGCTAAAAGAGTGCTTGGCGTCAGAATTAGCTCGAACCAAACACAGTGGTACTAATACAGGAGACTCAGTTGAAGTGGTCACCATGAATATGACTACAGAACTCTCTGATCCCCTGGCCAGGTAG 1545 0.4227 MSLTFVFLSFKETAQGDGNVSEYLLFFSGLSGNSYSSGSSSGSISIDCGLPAQPSYTESTTGINYVSNAKFISSGESKTIASNLKSAYQRQLWYSTDVFDRFWNYNVYNKDWTELSASIPADSLAQNDYKPPAIVMSTAATPVNVSEPMLVWWDPENVTDQFYVYMHFAELEVLAENQTRSFNITLNGKPWYSNLVPEYRSTGTAFTESAIGGERIQFLLEKTEHSTLPPIINALEIFTVKEFSQSLSSSGLTGHIDSSISKLTLLEKLDLSNNSLTGPVPDFLSQLQNLKILNLEKNNFTGSVPSDLVQKSNKGSLFLSIDQNPNLCESARCTKEEKKKNIIVPLVASVGGILILLLAMAAIFLTFKKRKSKGLEYLHNGCKPPIIHRDVKSTNILLNENFRAKLADFGLSKIIPTDEGTHVSTVVAGTPGYLDPELSGDFDSNSAWKAVEIAMACVSPNPNSRPNMSEVVIELKECLASELARTKHSGTNTGDSVEVVTMNMTTELSDPLAR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0375 514 Gene3D Ribonuclease Inhibitor 231 320 IPR032675 -
Glsi07g0375 514 SUPERFAMILY Protein kinase-like (PK-like) 373 474 IPR011009 -
Glsi07g0375 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 386 398 IPR008271 GO:0004672|GO:0006468
Glsi07g0375 514 SUPERFAMILY L domain-like 247 313 - -
Glsi07g0375 514 Pfam Malectin-like domain 90 240 IPR024788 -
Glsi07g0375 514 Gene3D Transferase(Phosphotransferase) domain 1 365 437 - -
Glsi07g0375 514 Gene3D Transferase(Phosphotransferase) domain 1 438 501 - -
Glsi07g0375 514 PANTHER OS07G0107800 PROTEIN-RELATED 373 479 - -
Glsi07g0375 514 ProSiteProfiles Protein kinase domain profile. 266 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0375 514 SMART serkin_6 247 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0375 514 Pfam Protein kinase domain 372 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0375 Glsi-ChrGlsi07 2574764 2579991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0375 41 87 Receptor kinase-like Gene Family AT2G19210 44.681 3.70e-06 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Glsi07g0375 Malectin_like 3.1e-40 CL0202