Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0372 ATGGGAACGTCTCAGAGTATCTTCTTTTCTTTTCTGGGTTGTCTGGTAATTCTTACAGTTCTGGTTCAAGCTCAGGATCAATCAGGATTCATCAGCATAGATTGTGGGCTACCTGCACAGCCCAGCTACACCGAGAGCACAACAGGCATAAACTACGTTTCAGATGCCAAGTTCATAAGTTCTGGTGAGAGCAAGACCATAGCATCTAATCTCAAAAGTGCCTACCAACGACAGCTATGGTTGGATTTAGGTTCAATCACCAACCAAACATACAGGTACAGCACAGATGTTTTTGATCGTTTCTGGAATTACAATGTCTACAACAAAGATTGGACGGAATTAAGTGCTTCAATTCCTGCAGATTCCTTAGCTCAGAACGATTACAAACCACCAGCAATTGTCATGAGCACTGCAGCCACACCAGTAAATGTGAGTGAACCAATGTTAGTTTGGTGGGACCCAGAGAATGTCACAGACCAATTCTATGTTTACATGCACTTCGCAGAGCTCGAGGTGTTAGCAGAGAATCAGACGAGATCATTCAACATCACCCTAAATGGCAAGCCATGGTACTCAAATCTTGTACCCGAGTACCGATCCACGGGTACTGCATTTACCGAGTCAGCTATCGGTGGAGAAAGGATTCAATTTTTACTTGAGAAGACTGAGCATTCAACCCTTCCTCCCATCATCAACGCCCTTGAGATTTTCACAGTTAAAGAATTTTCGCAGTCAGGAACTGATCAAGGAGATGTTGACGCAATTACAAGAATCAAGTCAACTTATGGGGTGACAAGAAATTGGCAAGGAGATCCATGTGGCCCAGTAGCCTATATGTGGGAGGGTCTAAATTGTACTTACAATGCCGAAAATCCTCCTAGAATCACAGCCTTGAGTTTATCTTCAAGTGGATTGACAGGGCAAATAGATTCTTCCATCTCAAAGCTCACCCTGTTGGAGAAGTTGGATTTATCAAACAACACCTTAACTGGACCAGTGCCTGATTTTCTGTCTCAATTACAAAACCTGAAGATCTTAAACTTGGAGAAGAACAACTTCACAGGTTCAGTTCCCTCTGATTTGGTTCAAAAATCAAACAAAGGTTCCCTTTTTCTGAGTGTTGACCAAAATCCAAATCTATGTGAATCTGCACGATGCACCAAGGAGGAAAAGAAGAAGAATATTATTGTTCCCTTAGTAGCATCAGTGGGTGGAATTTTGATCCTTCTGCTAGCCATGGCAGCTATATTTTTAACCTTTAAAAAGAGAAAATCAAAAGCTGTGGCTGTAGAAGCTAGTCCAAATAAGACCTCCCTGCAATTCAAAAAACAAAATGATGAATCACTGCAACTCAAAAATCCACAACATTCATATTCCGATGTCCTTCAAATCACCAACAACTTTAATACAATTCTTGGTAAAGGTGGATTTGGATCAGTTTATCTAGGCTATATCGATGACACTCCTGTTGCAGTGAAAATGCTCTCCCCATCATCAGTTCAAGGTTATCAGCAATTCCAAGCAGAGGTTAAGCTTCTTCTGAGAGTTCATCACAGAAATCTGACTTCCCTTATTGGGTATTGCAATGATGAAACCAATAAGGGGCTCATATATGAGTACATGGCTAATGGAAACTTACAAGAAGGACTTTCAGGAAAAGACAGCAACGTAAAGTACTATATATCAAACAGATTAACGGAGAAGACTGATATTTATAGCTTTGGAGTTGTTCTTTTAGAGATAATCACAAGTCAACCAGTAATATCAAGAAATCATGAGAGAGGTCACATAAGTCAATGGGTTGGCTCCATAATTTCTAAAGGGGATATCAAGAGCATTGTTGACTCAAGGTTAAGTGGAGACTTTGACAGTAACTCTGCTTGGAAAGCTGTAGAAATAGCAATGGCTTGTGTATCTCCGAACCCCAACAGCAGGCCAAATATGAGTGAGGTAGTGATAGAGCTAAAAGAGTGCTTGGCGTCAGAATTAGCTCGAACCAAACACAGTGGTACTAATACAGGAGACTCAGTTGAACTGGTCACCATGAATATGACTACAGAACTCTCTGATCCCCTGGCCAGTATCGATGCATTACCTGATGCACTGGATGAATTCACTGGAGGAGTTGTTCTTGTGAGTCATGATTCCAGATTGATATCCCGTGTATGCGAGGATGAAGAGAGGAGTCAAATCTGGGTAGTTGAGGATGGTACAGTCAGAACCGTCGATGGAACTTTTGATGATTACAAAGAGGATTTGATGAGAGAAATTAAAGCTGAAGTGGATGATTGA 2292 0.4123 MGTSQSIFFSFLGCLVILTVLVQAQDQSGFISIDCGLPAQPSYTESTTGINYVSDAKFISSGESKTIASNLKSAYQRQLWLDLGSITNQTYRYSTDVFDRFWNYNVYNKDWTELSASIPADSLAQNDYKPPAIVMSTAATPVNVSEPMLVWWDPENVTDQFYVYMHFAELEVLAENQTRSFNITLNGKPWYSNLVPEYRSTGTAFTESAIGGERIQFLLEKTEHSTLPPIINALEIFTVKEFSQSGTDQGDVDAITRIKSTYGVTRNWQGDPCGPVAYMWEGLNCTYNAENPPRITALSLSSSGLTGQIDSSISKLTLLEKLDLSNNTLTGPVPDFLSQLQNLKILNLEKNNFTGSVPSDLVQKSNKGSLFLSVDQNPNLCESARCTKEEKKKNIIVPLVASVGGILILLLAMAAIFLTFKKRKSKAVAVEASPNKTSLQFKKQNDESLQLKNPQHSYSDVLQITNNFNTILGKGGFGSVYLGYIDDTPVAVKMLSPSSVQGYQQFQAEVKLLLRVHHRNLTSLIGYCNDETNKGLIYEYMANGNLQEGLSGKDSNVKYYISNRLTEKTDIYSFGVVLLEIITSQPVISRNHERGHISQWVGSIISKGDIKSIVDSRLSGDFDSNSAWKAVEIAMACVSPNPNSRPNMSEVVIELKECLASELARTKHSGTNTGDSVELVTMNMTTELSDPLASIDALPDALDEFTGGVVLVSHDSRLISRVCEDEERSQIWVVEDGTVRTVDGTFDDYKEDLMREIKAEVDD 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0372 763 SUPERFAMILY Protein kinase-like (PK-like) 445 652 IPR011009 -
Glsi07g0372 763 Pfam Malectin-like domain 33 79 IPR024788 -
Glsi07g0372 763 Pfam Malectin-like domain 84 239 IPR024788 -
Glsi07g0372 763 Pfam Protein tyrosine and serine/threonine kinase 468 554 IPR001245 GO:0004672|GO:0006468
Glsi07g0372 763 Pfam Protein tyrosine and serine/threonine kinase 563 654 IPR001245 GO:0004672|GO:0006468
Glsi07g0372 763 Gene3D - 685 762 IPR027417 -
Glsi07g0372 763 Pfam Leucine rich repeat 293 353 IPR001611 GO:0005515
Glsi07g0372 763 FunFam Leucine-rich repeat receptor-like kinase 250 383 - -
Glsi07g0372 763 FunFam Leucine-rich repeat receptor-like protein kinase 440 540 - -
Glsi07g0372 763 PANTHER OS07G0107800 PROTEIN-RELATED 81 548 - -
Glsi07g0372 763 Gene3D Transferase(Phosphotransferase) domain 1 540 660 - -
Glsi07g0372 763 ProSitePatterns Protein kinases ATP-binding region signature. 472 493 IPR017441 GO:0005524
Glsi07g0372 763 SUPERFAMILY L domain-like 264 372 - -
Glsi07g0372 763 ProSiteProfiles Protein kinase domain profile. 466 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0372 763 Gene3D Ribonuclease Inhibitor 253 373 IPR032675 -
Glsi07g0372 763 Gene3D Phosphorylase Kinase; domain 1 448 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0372 Glsi-ChrGlsi07 2524000 2532320 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0372 7 74 Receptor kinase-like Gene Family AT2G19210 48.529 3.05e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Glsi07g0372 Malectin_like 1.5e-41 CL0202