Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0369 ATGAAGTATCAAAGTTTCTCCAAAGAGGTTTTGAGAGAAAACGACGAAGTTGAGGCACTTGAACTGCTCCGTCAGATTATACTTCTTTTCTCAATGGCTTGCTTTGGAGCTGTCATCCGAATGCTCTCATGCATGGTCTTGATGGCTACAAAAGAAACTCTATTCTCAGAACATAGAAACACTTTCATCACGGTAGCTGCCGCCATCCCACGAAACAGAGATGGCGACGCCACCAATGGGACCGCCGGGGAATCCAACGTTCGACGGAGCTCCGCCGCTGGTGCAACAGCCTCCGGGGACCGAATGACCGGAATATGCTTCCGAGACCATCTCTGGCTCAACACCTGTCCTCTCGATCGCAACCTAGTGTTCGATTATTTCGCCTTATCCCCCTTCTACGACTGGACCTGCAACAATGAACAGCTTCGAATGCGCTCTATTCACCCTCTTGATATCTCTCAGTTATCGAAAATGACAGGCATAGAGTATATGCTCAGTGAAGTTATGGAACCCCACCTTTTTGTTATTCGCAAGCAAAAGAGAGATGGCCCTGAGAAAGTTACTCCAATGCTGGCATATTACATCTTGGATGGTTCAATATACCAAGCACCACAACTATGCAATGTCTTTGCAGCACGAATTGGAAGGGCACTCTATTATATACAAAAGGCTTTTAGTACAGCTGCATCAAAGTTGGAGAAGATTGGATATGTTGATTCTGAAAATGAGGTTGCAGTGATAGAACCAAAGCGTAATCTACCTCCGGCTCCGCCGCCGCCACCATTTCCCGAAGGCTATGCTCCACCTCCGACAGCAGAAACTGAAAAAGGTCCTGAAACCCTTGAAGCAGGAGAACCTCAAGCTCCTCCTGTTGATCCCATAATTGATCAAGGACCTGCAAAAAGAATGAAATTTCAAGAAAGGATGACTATTATCATTGAGCAACCTGATCTCTTTGGGGTTGAAGCAGAGGAAAAGAGGACACCCATAAATGAGAAAGAAATGGGATTTTTGGTACCACAGACCAACTCATTTGGGCAAACATTTAGGGACTATGATGCTGAAAGTGGGAGGCAAGAAGGAGTGCAGAACTTCTACAGAAAAAACCACACTTACCAGACCTATGATTTCGTGAAGAGGATGAGAGAGGAGTATGGAAAATTGAACAGGGTAGAGATGAGCATATGGGAGTGTTGTGAACTGCTTAATGATGTGGTGGATGAGAGTGACCCTGACTTGGATGAGCCTCAGATTGAGCACTTGCTCCAAACTGCTGAAGCCATTAGGAAGGACTACCCAAATGAAGATTGGCTACATTTAACGGGCCTTATCCATGATCTTGGGAAGGTGCTTCTGCACCCTAGTTTTGGAGGGCTTCCTCAGTGGGCTGTCGTAGGTGATACATTTCCAGTTGGTTGCAGATTCGACACTTCAATTGTTCATCACCAGTATTTCAAGGAAAACCCAGACTATAACAATCCTGCATATAACACTAAATATGGAATTTACTCAGAGAATTGTGGACTTAACAATGTGATGATGTCATGGGGACATGACGACTATATGTATTTGGTGGCAAAGGAGAACAAGACTACTCTGCCTTCAGCTGCTCTGTTCATTGTCAGATACCATTCATTCTATGCGTTACATAGAGCGGAAGCTTATAAGCACTTAATGAATGATGAGGATGTTGAGAATCTGAAATGGCTCCAAATTTTCAACAAATATGACCTTTATAGCAAGAGCAAAGTCAGAATAGATGTTGAAAAGGTCAAACCTTACTATCTCTCCCTTATTGACAAGTACTTCCCTGCAAAGCTGAAGTGGTGA 1830 0.4426 MKYQSFSKEVLRENDEVEALELLRQIILLFSMACFGAVIRMLSCMVLMATKETLFSEHRNTFITVAAAIPRNRDGDATNGTAGESNVRRSSAAGATASGDRMTGICFRDHLWLNTCPLDRNLVFDYFALSPFYDWTCNNEQLRMRSIHPLDISQLSKMTGIEYMLSEVMEPHLFVIRKQKRDGPEKVTPMLAYYILDGSIYQAPQLCNVFAARIGRALYYIQKAFSTAASKLEKIGYVDSENEVAVIEPKRNLPPAPPPPPFPEGYAPPPTAETEKGPETLEAGEPQAPPVDPIIDQGPAKRMKFQERMTIIIEQPDLFGVEAEEKRTPINEKEMGFLVPQTNSFGQTFRDYDAESGRQEGVQNFYRKNHTYQTYDFVKRMREEYGKLNRVEMSIWECCELLNDVVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPSFGGLPQWAVVGDTFPVGCRFDTSIVHHQYFKENPDYNNPAYNTKYGIYSENCGLNNVMMSWGHDDYMYLVAKENKTTLPSAALFIVRYHSFYALHRAEAYKHLMNDEDVENLKWLQIFNKYDLYSKSKVRIDVEKVKPYYLSLIDKYFPAKLKW 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0369 609 SUPERFAMILY HD-domain/PDEase-like 352 609 - -
Glsi07g0369 609 PANTHER MYOINOSITOL OXYGENASE 309 609 IPR007828 GO:0005506|GO:0005737|GO:0019310|GO:0050113
Glsi07g0369 609 MobiDBLite consensus disorder prediction 74 97 - -
Glsi07g0369 609 MobiDBLite consensus disorder prediction 251 268 - -
Glsi07g0369 609 MobiDBLite consensus disorder prediction 250 296 - -
Glsi07g0369 609 Pfam MED6 mediator sub complex component 105 230 IPR007018 GO:0003712|GO:0006357|GO:0016592
Glsi07g0369 609 Pfam Myo-inositol oxygenase 360 609 IPR007828 GO:0005506|GO:0005737|GO:0019310|GO:0050113
Glsi07g0369 609 Gene3D Mediator complex, subunit Med6 98 228 IPR038566 -
Glsi07g0369 609 MobiDBLite consensus disorder prediction 78 97 - -
Glsi07g0369 609 FunFam Mediator of RNA polymerase II transcription subunit 6 99 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0369 Glsi-ChrGlsi07 2497361 2509084 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Glsi07g0369 MIOX 3.8e-125 CL0237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0369 07 2497361 2509084 Glsi07g0369 07 2497361 2509084 ECH