Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0359 ATGCAGTTTAAGCCCGAAGAAATTGCTGCCATCATGAAAGATTTTGATGAACCTGGCTCTCTTGCCCCAACTGGGTTACACCTTGGCGGTACAAAGTACATGGTCATCCAAGGAGAGCCCGGAGCTGTTATCCGTGGGAAGAAGGCTGCTGGCGGGATCACTGTTAAGAAAACCAGTCAAGCTCTGATTTTTGGTATTTATGACGAACCTTTGACTCCAGGACAGTGTAACATGGTTGTTGAGAGGTTGGGAGATTATTTGATTGATCAGGGGCTGTAG 279 0.4695 MQFKPEEIAAIMKDFDEPGSLAPTGLHLGGTKYMVIQGEPGAVIRGKKAAGGITVKKTSQALIFGIYDEPLTPGQCNMVVERLGDYLIDQGL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0359 92 SUPERFAMILY Profilin (actin-binding protein) 2 91 IPR036140 -
Glsi07g0359 92 PANTHER PROFILIN 2 91 IPR005455 GO:0003779
Glsi07g0359 92 SMART prof_2 1 92 IPR005455 GO:0003779
Glsi07g0359 92 CDD PROF 2 91 IPR005455 GO:0003779
Glsi07g0359 92 PRINTS Plant profilin signature 45 60 IPR005455 GO:0003779
Glsi07g0359 92 PRINTS Plant profilin signature 65 78 IPR005455 GO:0003779
Glsi07g0359 92 PRINTS Plant profilin signature 78 91 IPR005455 GO:0003779
Glsi07g0359 92 PRINTS Plant profilin signature 13 27 IPR005455 GO:0003779
Glsi07g0359 92 PRINTS Plant profilin signature 32 41 IPR005455 GO:0003779
Glsi07g0359 92 PRINTS Profilin signature 1 21 IPR005455 GO:0003779
Glsi07g0359 92 PRINTS Profilin signature 74 91 IPR005455 GO:0003779
Glsi07g0359 92 PRINTS Profilin signature 25 39 IPR005455 GO:0003779
Glsi07g0359 92 PRINTS Profilin signature 61 74 IPR005455 GO:0003779
Glsi07g0359 92 Pfam Profilin 2 91 IPR005455 GO:0003779
Glsi07g0359 92 Gene3D Dynein light chain 2a, cytoplasmic 1 92 - -
Glsi07g0359 92 FunFam Profilin 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0359 Glsi-ChrGlsi07 2437898 2438944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0359 2 92 Cytoskeleton Gene Families AT4G29340 78.022 2.51e-50 153