Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0355 ATGGATATAAGGTCAAGAAATGAGGAGGTGTCTCCCCAGCTGCTAGATTTAATTCCAAAAGACAACGAGTGGCATATGAACGGAGGCGAAGGAAGAAGAAACCACAAGGCTTCTGAGGAGAGAAAACTCGAGCTCAGACTTGGTCCACCCGGTGAAGACTGGTCTCTCAATGATAACAACATGAAGAACGTCAACAGAGAAAGAGACGAGTCACTACTCTCTCTTGGTTACTTCTCTAACATACCTCCTACAACCCAGAAAATTTCTACCTCTGAAAATCCATGGGCTTCCACAAGCTACCAGGGGAAGACCCAGCATAATTATCAACATCATCAGGCCAGAGCTTCGTCATTTCTTCAGTTCCAATCTGGCCCACAGAGCGTGCCAGTGGTAGACTTGCAGAATGCAGAGAACAAAGCTTTCTCACCCTCTTCTGTCGCAAATACAGCTGTGCCAAACACCTCTCAGAAAAGAACTGCTCCCGGTCCGGTGGTGGGGTGGCCTCCAATTCGTTCTTTTAGGAAGAACCTTGCGAACAGCAGCTCATCTAAGCAAGCTACTGAGTCCCAGCAACATCAACTTGTTCCAGACAAGGTTGCTGGTAAAAAACCTATTGACAACGTTGGCAAAGGCTTGTTTGTAAAGATCAATATGGATGGAGTTCCCATTGGGAGAAAAGTGGACCTTAATGCTTACGACAGCTATGGGAAACTCTCCTCCGCTGTTGATGAACTCTTCAGATGCCTCCTTGCAGCTCAAAGAGATTCCTGTGCTGGTGGAATTCAGAACAAGGAAGAGGAAGAGAAAGCAATTACGGGTTTATTGGATGGAAGCGGGGAATATACTCTTGTTTATGAGGATAATGAAGGAGACAGGATGCTTGTTGGGGATGTGCCATGGCACATGTTCATATCGACGGTGAAGAGGCTGCGCGTGTTGAAGAGTTCTGAGCTTTCTGCTTTTACCCTTGCAAACAAGCAAGGCAAAAAAACCACTTGA 999 0.4635 MDIRSRNEEVSPQLLDLIPKDNEWHMNGGEGRRNHKASEERKLELRLGPPGEDWSLNDNNMKNVNRERDESLLSLGYFSNIPPTTQKISTSENPWASTSYQGKTQHNYQHHQARASSFLQFQSGPQSVPVVDLQNAENKAFSPSSVANTAVPNTSQKRTAPGPVVGWPPIRSFRKNLANSSSSKQATESQQHQLVPDKVAGKKPIDNVGKGLFVKINMDGVPIGRKVDLNAYDSYGKLSSAVDELFRCLLAAQRDSCAGGIQNKEEEEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFISTVKRLRVLKSSELSAFTLANKQGKKTT 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0355 332 Gene3D - 206 327 - -
Glsi07g0355 332 MobiDBLite consensus disorder prediction 174 194 - -
Glsi07g0355 332 MobiDBLite consensus disorder prediction 23 48 - -
Glsi07g0355 332 MobiDBLite consensus disorder prediction 144 160 - -
Glsi07g0355 332 MobiDBLite consensus disorder prediction 1 59 - -
Glsi07g0355 332 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 41 318 IPR003311 GO:0005634|GO:0006355
Glsi07g0355 332 MobiDBLite consensus disorder prediction 144 198 - -
Glsi07g0355 332 FunFam Auxin-responsive protein 206 327 - -
Glsi07g0355 332 Pfam AUX/IAA family 43 320 IPR033389 -
Glsi07g0355 332 ProSiteProfiles PB1 domain profile. 211 315 IPR000270 GO:0005515
Glsi07g0355 332 SUPERFAMILY CAD & PB1 domains 207 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0355 Glsi-ChrGlsi07 2404618 2406948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0355 215 326 B3 DNA Binding Superfamily AT4G23980 33.929 5.34e-14 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Glsi07g0355 AUX_IAA 3.4e-73 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0355 07 2404618 2406948 Glsi07g0355 07 2404618 2406948 ECH