Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0354 ATGAACCTTGTACGGAACCCCAAGTCGAAGTTGCTTTACTTTCTTTTCTTTCTGCTTCACCTTCATGTTCTCAGTTCCTACCCGACACCCTTGAGCTGTACGGACACAACTCGCGTTTGCGCTTCTTTCTTGGCCTTTAAACCGCAACCAAACCAGACGCTGGCCGTGATACAGAGCATGTTTGATGTATTGCCCAGTGACATAACTGTCGAAGGCAATGGCTGGGATTACATATTCATCAGGAAGAACTGTTCTTGTGCTGCTGGTATAAAGAAATATGTATCAAACACCACTTTCACAGTGAAATCCAATGAAGGGTTGGTGCATGACTTGGTCATGGATGCCTATGATGGGCTTGCCCTCTTGCCCAACACGACCCGGAAGGCAAAAAATGGCGCCGTGATATCACTGAGGTTGTTTTGTGGCTGCTCTAGTGGACTTTGGAACTATTTGGTGAGTTATGTCATGAGAGATGGGGATAGTGTTGAATCTTTGGCGAGTCGGTTCGGCGTTAGTATGGATAGTATTGAAACGCTAAATGGCATCGATAATCCAGATAATGTCACTGTGGGTTCTCTGTATTATATACCTCTGGATTCGGCTCCTGGTGAGCTGTATACCCCGAAGAATGATACTCATCCGGCTCCTGTTCCTGCCCCATCTGTTGACAAATTTTCAGCTAATCAAGTCAATCATAAGGCTCATGCATCATATGGATTAATCATTGGCGGTTTGGGGGTTGGTCTTGCTCTCGTAATATTAAGCATAATACTCTGTGTTTACTTGAGATCATCAAATAATTTTGCTGAAGCGAGAAGAAGTCATGTAAAAGATACTGAGGGCAAGATCTTTCATAAATTCCATATTCTTCGAAATTCAAGTTTTTGTTGTGGTTCAGGAAGGTACATACGTGACAAACCTGCAGACCAGAAGCAAACTGATGGTGAATCCAACAACCACCAGATTACTATTCCCAAAGTTTCAACTCTGGGCTCTGATGTATTTGAAATGGATAAGCCAATAGTTTTCACATATGAAGAGATTTTTTCCTCAACTGATTGCTTCTCTGATTCAAATCTACTTGGGCATGGAACATATGGTTCTGTTTACTATGGCCCACTTCGCGACCAGGAGGTTGCCATTAAAAGAATGACTGCTACAAAGACTAAAGAATTTATGTCAGAGATGAAAGTCCTGTGCAAGGTTCATCATGCAAATTTGGTAGAGTTGATCGGCTATGCTGCTAGTCATGATGAGCTTTTCCTTATTTATGAATACGCACAGAAGGGTTCACTCAAAAGCCATTTGCATGATCCTCAGAATAAGGGTCATTCCTCACTTTCTTGGATCATGAGGGTCCAGATTGCACTTGATGCTGCTAGGGGCCTTGAATACATTCATGAGCACACCAAAAACCATTACATCCATAGAGATATTAAGACAAGCAACATTTTACTTGATGCTTCCTTCAGAGCAAAGATTTCAGATTTTGGGTTAGTAAAACTTGTCGAGGGGGAAATTACTACAACCAAAGTTATTGGTACATATGGTTATCTTGCTCCTGAATACTTGAGTGATGGCCTTGCAACAACCAAAAGTGATGTCTATGCATTTGGTGTTGTTCTCTTTGAGATTATATCAGGGAAGGAGGCCATCATAAGAACAGAAGGCACAATGACAAAAAATCCTGAAAGACGTTCGTTGGCATCTATTATGTTGGCAGCTCTTAGAAACTCACCTGATTCCTTGAGCATGTCAAGCATGAGAGATTATATTGATCCTAATATGATGGATCTGTATCCTCATGATTGTGTATACAAGATGGCCATGCTGGCAAAGCAATGCTTGGATGACGACTCCATCTTGCGACCTGATATGAAACAAGTTGTGATTTCCCTCTCTCAGATTCTCTTGTCATCTATTGAGTGGGAAGCAACTCTTGCTGGGAACAGTCAGGTTTTCAGTGGGCTTGTTCAGGGAAGATAG 1986 0.4204 MNLVRNPKSKLLYFLFFLLHLHVLSSYPTPLSCTDTTRVCASFLAFKPQPNQTLAVIQSMFDVLPSDITVEGNGWDYIFIRKNCSCAAGIKKYVSNTTFTVKSNEGLVHDLVMDAYDGLALLPNTTRKAKNGAVISLRLFCGCSSGLWNYLVSYVMRDGDSVESLASRFGVSMDSIETLNGIDNPDNVTVGSLYYIPLDSAPGELYTPKNDTHPAPVPAPSVDKFSANQVNHKAHASYGLIIGGLGVGLALVILSIILCVYLRSSNNFAEARRSHVKDTEGKIFHKFHILRNSSFCCGSGRYIRDKPADQKQTDGESNNHQITIPKVSTLGSDVFEMDKPIVFTYEEIFSSTDCFSDSNLLGHGTYGSVYYGPLRDQEVAIKRMTATKTKEFMSEMKVLCKVHHANLVELIGYAASHDELFLIYEYAQKGSLKSHLHDPQNKGHSSLSWIMRVQIALDAARGLEYIHEHTKNHYIHRDIKTSNILLDASFRAKISDFGLVKLVEGEITTTKVIGTYGYLAPEYLSDGLATTKSDVYAFGVVLFEIISGKEAIIRTEGTMTKNPERRSLASIMLAALRNSPDSLSMSSMRDYIDPNMMDLYPHDCVYKMAMLAKQCLDDDSILRPDMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0354 661 FunFam PTI1-like tyrosine-protein kinase 3 427 647 - -
Glsi07g0354 661 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 24 655 IPR044812 GO:0019199|GO:0045087
Glsi07g0354 661 ProSitePatterns Protein kinases ATP-binding region signature. 361 382 IPR017441 GO:0005524
Glsi07g0354 661 Pfam LysM domain 154 191 IPR018392 -
Glsi07g0354 661 Gene3D Transferase(Phosphotransferase) domain 1 428 647 - -
Glsi07g0354 661 FunFam Kinase family protein 329 426 - -
Glsi07g0354 661 Pfam Protein tyrosine and serine/threonine kinase 359 631 IPR001245 GO:0004672|GO:0006468
Glsi07g0354 661 SUPERFAMILY LysM domain 152 197 IPR036779 -
Glsi07g0354 661 SUPERFAMILY Protein kinase-like (PK-like) 332 633 IPR011009 -
Glsi07g0354 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Glsi07g0354 661 ProSiteProfiles LysM domain profile. 152 196 IPR018392 -
Glsi07g0354 661 SMART serkin_6 355 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0354 661 ProSiteProfiles Protein kinase domain profile. 355 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0354 661 Gene3D LysM domain 149 206 IPR036779 -
Glsi07g0354 661 SMART LysM_2 153 197 IPR018392 -
Glsi07g0354 661 Gene3D Phosphorylase Kinase; domain 1 328 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0354 Glsi-ChrGlsi07 2385485 2391986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0354 30 661 Receptor kinase-like Gene Family AT1G51940 67.081 0.0 824
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Glsi07g0354 PK_Tyr_Ser-Thr 3.3e-49 CL0016