Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0324 ATGATGGCCGGGAACCCTAACTGGTGGAGCATGCATGCACCGTCTTTGAATATCCCTCCCCAATATGTGCATGGATCTTCAATTCCTTTAAATTCTCTCTCAGAAAACCCAGAGACCCCTCACTCTTGGAGCCAACTTCTTTTCTCTGGAATACCAGGGGAAGAAGAGAGATTGGGTTTCAATCATTTTCAATCTAAGAAGTTGGAAAACTGGGATGACCAAGTTGATCTTAATCCATCCTCTAGAGTTAGTCTTCTCAATGCTATAAAGCAAGAAGTTTCCCAGAGTGGCAATTTGTACGGCCATGGGCGCGAGGAATTTCATGCTTCAGGATCAGCAAGGTCATCTTGGTCACTTGCGGTGCCAGTTTCTTCCCCTAGCACAGCCACTGCTGGAGTTTGTAAGAAAGCTAGGATTCAACCATCTTCAAGCCAACCTCCTCTGAAGGTGAGAAAGGAGAAGCTAGGTGATAGAATAACAGCACTTCACCAGCTAGTTTCCCCATTCGGAAAGACTGACACGGCTTCTGTGTTGTTAGAATCCATTGGATATATCAGATTCCTTCAGGGTCAAATTGAGGCACTGAGCTCTCCTTATTTGGGCAATTCAGCAAAAAATATGAGGAATCAACAGTCTGTACACAGAGAAAGAAATTCGGTATTTCCTGAGGACCCCGGTCAGGATGCAGAAGATAAGCCAAAGAAGGACTTGAAGAGTAGAGGGTTGTGCTTGGTGCCTGTCCTCCTCTTTGCCTCCTCCACGTTTCAAACTCACACCTCCATATCTGAAATTGGGTGTGCCCAAGTTGCGATCTTGTGTCTCCGCAGTGCGCTCATCTATAGAAAAGCTATTCAGTTGAGGCCTATATCTGTCCGCTTAAATCCTGGGTTTGACGAAGCTGAGCTGGAAATGGCAGATAATTGGAGTCGCACGGCTCTTCTTGTGATTGACATGCAGAGAGATTTTATAGAAGATGGGGGTCCCATGAGAGTAAATGGAGGCAAAGACATAGTCCCAAACGTAATTAAGGCTGTGGAAGTTGCTAGGCAGCGTGGCATACTCGTAGTTTGGGTTGTACGGGAACATGATCCCTTAGGAAGAGATGTTGAACTCTTTCGTAGGCATTTGTACGCAGCAGGGGAAGTTGGACCAACCACTAAGGGAAGCGCAGGTGCAGAATTAGTTGATGGCTTGGTAATTAGAGAAGGGGATTATAAGCTGGTGAAGACAAGGTTTAGTGCATTTTTTGCTACACACCTTCATTCACTCCTTCAAGGATTGGGGATCAATAGTCTGGTGATCACTGGTGTTCAAACTCCAAATTGCATCAGGCAGACCGTCTATGATGCTGTAGCATTGGATTATCAACCTGTAACTGTTATTGTTGATGCCACTGCTGCTACCACACCAGATATTCATCTTGCCAATATGTTTGACATGAAAAACATCGGAGTTGCGACCCCAACATTGCAAGAATGGAACAAGTCCGAAGCTTGA 1497 0.4542 MMAGNPNWWSMHAPSLNIPPQYVHGSSIPLNSLSENPETPHSWSQLLFSGIPGEEERLGFNHFQSKKLENWDDQVDLNPSSRVSLLNAIKQEVSQSGNLYGHGREEFHASGSARSSWSLAVPVSSPSTATAGVCKKARIQPSSSQPPLKVRKEKLGDRITALHQLVSPFGKTDTASVLLESIGYIRFLQGQIEALSSPYLGNSAKNMRNQQSVHRERNSVFPEDPGQDAEDKPKKDLKSRGLCLVPVLLFASSTFQTHTSISEIGCAQVAILCLRSALIYRKAIQLRPISVRLNPGFDEAELEMADNWSRTALLVIDMQRDFIEDGGPMRVNGGKDIVPNVIKAVEVARQRGILVVWVVREHDPLGRDVELFRRHLYAAGEVGPTTKGSAGAELVDGLVIREGDYKLVKTRFSAFFATHLHSLLQGLGINSLVITGVQTPNCIRQTVYDAVALDYQPVTVIVDATAATTPDIHLANMFDMKNIGVATPTLQEWNKSEA 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0324 498 PANTHER OS02G0276400 PROTEIN 303 495 - -
Glsi07g0324 498 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 149 201 IPR036638 GO:0046983
Glsi07g0324 498 MobiDBLite consensus disorder prediction 217 235 - -
Glsi07g0324 498 FunFam Transcription factor bHLH123 family 149 212 - -
Glsi07g0324 498 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 188 IPR011598 GO:0046983
Glsi07g0324 498 SUPERFAMILY Isochorismatase-like hydrolases 305 493 IPR036380 -
Glsi07g0324 498 MobiDBLite consensus disorder prediction 206 235 - -
Glsi07g0324 498 Gene3D - 149 215 IPR036638 GO:0046983
Glsi07g0324 498 Pfam Isochorismatase family 311 486 IPR000868 -
Glsi07g0324 498 CDD bHLH_AtbHLH_like 149 196 IPR045239 -
Glsi07g0324 498 CDD cysteine_hydrolases 312 481 - -
Glsi07g0324 498 Gene3D - 297 497 IPR036380 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0324 Glsi-ChrGlsi07 2144706 2158348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0324 135 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 73.684 1.30e-35 134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0324 07 2144706 2158348 Glsi07g0324 07 2144706 2158348 ECH