Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0320 ATGAGCGGTTCATTTAAGTCTTTCAACAAACAACTCAGGCTCCTCCTTTTTCATAAACGCTCTCTGATTTCAGCTCCTTATGGTTTCATAGCTTCCTGTTCTCTCACTCTCTCACCACGTCGTTTATACCCCAGGTTTTGTTCCTCGCAGTTTCGGTTATACTCGTCATCTCCTTCTGCTGCATTTATGGAGGTGGTCACAGCAGTTGCTAAACAAGGCCTTGAAGCTCAGGACAGTGTTGCTATTAGAGCAGATCAGAAGAGTTACAGTTACATGCAGCTCATCTCATCTGCACAGGAGATATCAAATCTATTGTGTGACAATGATGTGAATAAAGGAAATCTTGGTGGAGCTCGAATAGGAATTGTAGCCAAACCCTCTGCTGAGTTTGTTGCTGGAATTCTAGGTACTTGGTTTAGTGGAGGTGTTGCTGTGCCACTTGCACTGAGCTATCCAGAAGCAGAGCTCTTGCATGTGACAAATAATTCGGATGTGTCTGTGGTACTGAGTACTGAAGATCATAGTGAACTTATGCAAAATATTGCCAATAAAAGCTCTGCTCAGTTTTTTCATATTCCTCCTGTTCCCAATAAGTCTTCAGAGAAAAGCAGAGATGAACATTCACAAAGTAGAGAAATTGATGTGGAAAATTTTTTTCAGGGCAACATTAAAATATCAATTGAGGATCCGGCATTGATTTTGTACACTAGTGGGACAACAGGAAAACCTAAGGGAGTTGTACACACACACAGAAGTATCGCTGCACAGGTCCAAACCTTGACAAAAGCATGGGAGTACACATCTGCTGATCAATTCCTGCATTGTCTACCACTACATCATATCCATGAAAACTTTAATGTTGAGTTTATGCCCAAATTTAGTGTGAGAGGAATTTGGCAGAGATGGCGCGAGGCATATCCTGCTGAAGGAACAAAGGCTGATGACGCTATAACTGTGTTCACTGGAGTTCCAACTATCTATACCCGATTAATACAAGGTTACCAAGCAATGGATCCTGAACTACAAGCTGCTTCAGCAGCTGCTGCAAGAAACTTGCGGCTAATGATGTGTGGGTCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGGCATCAGTTGTTGGAGCGATATGGCATGACAGAATTTGTCATGGCAATATCAAATCCCTTGAAAGGTGAGCGGAAAGCAGGCACTGTTGGCAAACCTTTTCCTGGTGTGCAGGTTAAGATTCTTGCAGACGAGGAGAGTGGAGGTGATACAACGAGAGTGGGTGAGCTTTGCATTAAAAGCCCATCATTGTTTAAAGGATATTGGAAACTTCCTGAGGTAACGAAGGAATCATTTATTGATGATGGCTTCTTTAAAACTGGAGATGCAGTTACTATCGATGAAGATGGATATTACATCATTCTGGGACGTACTAATGCTGACATAATGAAGGTTGGTGGCTACAAACTGTCTGCATTAGAAATTGAATCGGTTATATTAGAGAATCCAGCTGTCTCAGAGTGTTGTGTGCTGGGCTTACCCGACAAAGCTTACGGCGAAGTTGTTTGTGCAATTATTGTGCCAGAGGCGGAGAATAAAAAAAAGCGAGATGAAGAGTTGAAGCCTGCTATAAGCTTAGAAGAATTGTCCACCTGGGCCAAAGACAGACTTGCACCTTACAAGATACCAACTCGACTATTCCTGTGGGAGACTCTCCCTCGTAATGCCATGGGGAAGGTGAATAAAAAAGAGTTGAAGAAATTGCTGGCCTCAGATCAGTAA 1785 0.4286 MSGSFKSFNKQLRLLLFHKRSLISAPYGFIASCSLTLSPRRLYPRFCSSQFRLYSSSPSAAFMEVVTAVAKQGLEAQDSVAIRADQKSYSYMQLISSAQEISNLLCDNDVNKGNLGGARIGIVAKPSAEFVAGILGTWFSGGVAVPLALSYPEAELLHVTNNSDVSVVLSTEDHSELMQNIANKSSAQFFHIPPVPNKSSEKSRDEHSQSREIDVENFFQGNIKISIEDPALILYTSGTTGKPKGVVHTHRSIAAQVQTLTKAWEYTSADQFLHCLPLHHIHENFNVEFMPKFSVRGIWQRWREAYPAEGTKADDAITVFTGVPTIYTRLIQGYQAMDPELQAASAAAARNLRLMMCGSSALPQPVMQEWEAITGHQLLERYGMTEFVMAISNPLKGERKAGTVGKPFPGVQVKILADEESGGDTTRVGELCIKSPSLFKGYWKLPEVTKESFIDDGFFKTGDAVTIDEDGYYIILGRTNADIMKVGGYKLSALEIESVILENPAVSECCVLGLPDKAYGEVVCAIIVPEAENKKKRDEELKPAISLEELSTWAKDRLAPYKIPTRLFLWETLPRNAMGKVNKKELKKLLASDQ 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0320 594 PANTHER ACYL-COA SYNTHETASE 67 588 - -
Glsi07g0320 594 Pfam AMP-binding enzyme 76 485 IPR000873 -
Glsi07g0320 594 FunFam Acyl-CoA synthetase family member 3 71 478 - -
Glsi07g0320 594 Pfam AMP-binding enzyme C-terminal domain 495 580 IPR025110 -
Glsi07g0320 594 CDD MCS 78 588 - -
Glsi07g0320 594 ProSitePatterns Putative AMP-binding domain signature. 233 244 IPR020845 -
Glsi07g0320 594 Gene3D - 482 594 IPR045851 -
Glsi07g0320 594 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Glsi07g0320 594 Gene3D - 63 478 IPR042099 -
Glsi07g0320 594 SUPERFAMILY Acetyl-CoA synthetase-like 54 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0320 Glsi-ChrGlsi07 2117362 2124172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0320 204 592 Monolignol Biosynthesis Gene Families AT4G19010 27.363 5.54e-37 143
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0320 07 2117362 2124172 Glsi07g0320 07 2117362 2124172 ECH