Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0303 ATGTCTTCGCCGCTTCCGGAGACATCTCCGGTAACCAACTCCACCAGTCCTCCGCCGCCTGCAACCACCAATGACACCCCACCGGCGCCGACAGCCACTGCCACTCCGAGTAATTTCCCGCCTACTTCCAGGGCTTTGCCGTCGCAGCCTCCGCCAGAACCGCCGGGGGGAATGCCGAGGGCTACACTAATCGGATTAGTTATAGCGGCCGTGTTTGGTTCGCTGCTTACGCTGATTTTTGTTGGCGTGTGCGCCTTTTGCTATAAAAGGAGGAAGCGGAGAAGGATGAGACGATACGGATTGGACAACTACTCTACTGCTCCTTTACAACAACCGAAAGCTGACCAGTTTGGTGGTCCACCTCAGCATTGGCAAGGGACTGTTCCTCCTCCAACAGATGGTGGAGTAACATTGCTTCCAAAGCCAACTCCACCCCCCGGAGCTGGGTTGAATCAGCAACAGTCATCCGTTAATGTCCCAACTCCCCCTATCTATTCTTCAACGAGCACAAGTTTGGATTCTGAGAGGCTTGCACCATCTCCTGCCATTACCTTGGGACTTTCGCAAAGCTCATTTACATATGAAGAATTATCTTTTGCAGCAAATAGATTCTCAAACTCAAATCTTCTTGGTCAAGGTGGTTTTGGCTATGTTCATAAAGGAGTCCTACCAAATGGAAAAAGTGTTGCAATTAAGCAGCTGAAATCTGGTAGCAGACAGGGGGAGCGTGAGTTCCAGGCTGAAGTTGAGGTCATTAGCCGAGTCCATCACAGACATCTTGTTTCCCTCGTTGGATACTGCATTGCTGGAGCTCAGAGGATGCTTGTTTATGAGTTTGTCCCAAATGATACACTAGAATTCCATTTGCATGGAAAGGAGAGACCAACTATGGACTGGCCAACAAGGATGAAGATTGCTATTGGATCTGCAAAAGGATTGGCATATCTGCATGAAGACTGTCAACCCAAAATCATACACCGTGACATCAAGGCATCTAACATTCTTCTTGATGATAATTTTGAGGCAAAGGTTGCAGATTTTGGACTTGCCAAAATTTCATCAGACTCTGATACCCATGTCTCTACTCGAGTAATGGGAACCTTTGGATACTTGGCTCCAGAATATGCTGCCAGTGGGAAGCTCACTGATAAGTCAGATGTATTCTCCTTTGGTGTTGTGCTTTTGGAGTTGATTACAGGACGAAAACCTGTTGATAAAACTGAGTCTTTCACAGATGACAGTATGGTTGAGTGGGCAAGACCTTTACTCTCCCAAGCTCTGGAAAGTGGCAACTTTGATGCTCTTGTTGATCCAAGGTTGCAGAAGAGTTACAACTCTGATGAGATGGTTCGAATGATTACTTGTGCTGCAACTTGTGTACGCCATTCAGCCAGGCGCCGGCCTCGAATGAGCCAGGTAGTTCGAGCTCTTGAAGGAAATATTTCTCTAGATGGTCTGAATGAGGGGAGCACACCTGGGCACAGCAGAGTATTTAGTTCCTTTGAGAGTTCAAGTTATGATACTGGCCAATACAATGAGGACCTGAAGAAGTTCAGGAAGCTGGCACTAGAAGGCCAAGGCCAAGGCACTAGTGAATACAGTGGGCCTAGTAGTGAGTATGGCCAACATGCTTCTGCCTCGAGCAGTTCAGGCCAGCAAAATGCTCAAGAGACATAA 1677 0.477 MSSPLPETSPVTNSTSPPPPATTNDTPPAPTATATPSNFPPTSRALPSQPPPEPPGGMPRATLIGLVIAAVFGSLLTLIFVGVCAFCYKRRKRRRMRRYGLDNYSTAPLQQPKADQFGGPPQHWQGTVPPPTDGGVTLLPKPTPPPGAGLNQQQSSVNVPTPPIYSSTSTSLDSERLAPSPAITLGLSQSSFTYEELSFAANRFSNSNLLGQGGFGYVHKGVLPNGKSVAIKQLKSGSRQGEREFQAEVEVISRVHHRHLVSLVGYCIAGAQRMLVYEFVPNDTLEFHLHGKERPTMDWPTRMKIAIGSAKGLAYLHEDCQPKIIHRDIKASNILLDDNFEAKVADFGLAKISSDSDTHVSTRVMGTFGYLAPEYAASGKLTDKSDVFSFGVVLLELITGRKPVDKTESFTDDSMVEWARPLLSQALESGNFDALVDPRLQKSYNSDEMVRMITCAATCVRHSARRRPRMSQVVRALEGNISLDGLNEGSTPGHSRVFSSFESSSYDTGQYNEDLKKFRKLALEGQGQGTSEYSGPSSEYGQHASASSSSGQQNAQET 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0303 558 Pfam Protein tyrosine and serine/threonine kinase 207 477 IPR001245 GO:0004672|GO:0006468
Glsi07g0303 558 MobiDBLite consensus disorder prediction 527 558 - -
Glsi07g0303 558 MobiDBLite consensus disorder prediction 43 57 - -
Glsi07g0303 558 FunFam Proline-rich receptor-like protein kinase PERK1 280 488 - -
Glsi07g0303 558 ProSitePatterns Protein kinases ATP-binding region signature. 210 232 IPR017441 GO:0005524
Glsi07g0303 558 SUPERFAMILY Protein kinase-like (PK-like) 181 477 IPR011009 -
Glsi07g0303 558 ProSiteProfiles Protein kinase domain profile. 204 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0303 558 MobiDBLite consensus disorder prediction 27 42 - -
Glsi07g0303 558 MobiDBLite consensus disorder prediction 11 26 - -
Glsi07g0303 558 MobiDBLite consensus disorder prediction 522 558 - -
Glsi07g0303 558 FunFam proline-rich receptor-like protein kinase PERK1 182 279 - -
Glsi07g0303 558 ProSitePatterns Serine/Threonine protein kinases active-site signature. 324 336 IPR008271 GO:0004672|GO:0006468
Glsi07g0303 558 Gene3D Transferase(Phosphotransferase) domain 1 280 486 - -
Glsi07g0303 558 MobiDBLite consensus disorder prediction 1 57 - -
Glsi07g0303 558 Gene3D Phosphorylase Kinase; domain 1 167 279 - -
Glsi07g0303 558 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 74 528 IPR047117 -
Glsi07g0303 558 SMART serkin_6 204 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0303 Glsi-ChrGlsi07 2024047 2028546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0303 27 547 Trihelix Transcription Factor Family AT1G70460 50.185 1.27e-167 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Glsi07g0303 PK_Tyr_Ser-Thr 1.6e-48 CL0016