Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0299 ATGAAGGGCGCATATGTCTCTTCATTCGTCTCCCTTCCCGCCATTTTCTTTTTCTTCCATCTCAAATCTTCTCAACCTTTCAGCGTGGAACTCTGCAACTCAGGTTCCAAAGAAGCCATAACCAAGGAAAAAAAGATGCCAAATTTGATCCTTAACATGGAACAAATGCCGAAGATGAGCTTCCTAATGCTTCTACTCTGCCTTTTGGTTACTTTCAAGAACCAAAACACCCGGACCAACAAGGGGTTCAGAACCCACAGATGGCCCTCTCCCTTATACTCACCTTCGGTTCCTGTGGATTCATTTCTGAATCGACCTGTATCATTATCCGTGAAGAATGAGGATGAACTGGCCCAGCACGACGATTCTTCCCATTGGCTTAAATACGATTACTATCGCTACTCGTGCCCACAGGCAGAGCAGATTATTCGGGCCACGGTCCAGAATCTGCACCGCGTCAGACCCAATGTAGCTCCTTCTCTGATTCGCCTTGCTTTCCACGATTGCTTCATCCAGGCTGGTGGTCCATTCTATCCACTGCTTACCGGAAGGAGAGACGGTTCCAACTCTTTCTCTGACATTGCAACAGAAGAGCTTCCTTCACCCCACAATGACTTATCTCGAACTCTTGAATCCTTTGCATCAAGGGGGTTTAATGAAAGGGAAACGGTCACTCTCTTAGGTGTTTTACTGTTTGGTTATGTCTTCGGTTTCTGCATTTGCTGTTATATGGTTCTTCTTTTGCTAATCTTCCATTTTTTTTCCATCAGTGATAACTTGGAGTCTGTCCCTTCTTTCTTTCCAGGTGCCCACAGCATTGGGGTAATCCACTGCAAATTTTTCCATAACCGTCTCTACAACTTTACAGGAACTAATGATCCTGACCCTTCTCTAGATACTGAATTTCTAAATCTGCTAAGATCAAGATGTAATGGCACAGATGCATCACCCCCTTCAACATCAGAAACGCTAAGGCCAAGACCCCACAAAGGCTCAACTTCTCTCTCAGACGAAGAGCCAGGAATTGCTATGGACTTTGAGCAGCCTGGATTAAATTTTGGTACAAAATACTACCGCAACCTCTTGCAAAATAAAGGTATACTTTATGCTGACCAGCAGTTAATGGGAGGGGAAAGAACTGAGAATTGGGTTAAAGCATACGCATTTGATCCCTTCCTGTTCCGAATAGATTTCTCCTTGGCTATGATGAAGCTCTCGGATCTCCAGGTCTTGACGCAGCCTATGGGTCAGATTCGGCTCAATTGCTCAAAGAATGTTGTATGA 1284 0.447 MKGAYVSSFVSLPAIFFFFHLKSSQPFSVELCNSGSKEAITKEKKMPNLILNMEQMPKMSFLMLLLCLLVTFKNQNTRTNKGFRTHRWPSPLYSPSVPVDSFLNRPVSLSVKNEDELAQHDDSSHWLKYDYYRYSCPQAEQIIRATVQNLHRVRPNVAPSLIRLAFHDCFIQAGGPFYPLLTGRRDGSNSFSDIATEELPSPHNDLSRTLESFASRGFNERETVTLLGVLLFGYVFGFCICCYMVLLLLIFHFFSISDNLESVPSFFPGAHSIGVIHCKFFHNRLYNFTGTNDPDPSLDTEFLNLLRSRCNGTDASPPSTSETLRPRPHKGSTSLSDEEPGIAMDFEQPGLNFGTKYYRNLLQNKGILYADQQLMGGERTENWVKAYAFDPFLFRIDFSLAMMKLSDLQVLTQPMGQIRLNCSKNVV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0299 427 Gene3D - 127 172 - -
Glsi07g0299 427 Gene3D Peroxidase, domain 2 252 405 - -
Glsi07g0299 427 PRINTS Haem peroxidase superfamily signature 158 172 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g0299 427 PRINTS Haem peroxidase superfamily signature 263 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g0299 427 PRINTS Haem peroxidase superfamily signature 346 361 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g0299 427 Pfam Peroxidase 172 389 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g0299 427 ProSitePatterns Peroxidases active site signature. 158 169 IPR019794 GO:0004601
Glsi07g0299 427 Gene3D Peroxidase, domain 2 200 233 - -
Glsi07g0299 427 ProSiteProfiles Plant heme peroxidase family profile. 161 426 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g0299 427 PANTHER PEROXIDASE 25-RELATED 70 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g0299 427 MobiDBLite consensus disorder prediction 312 330 - -
Glsi07g0299 427 MobiDBLite consensus disorder prediction 312 342 - -
Glsi07g0299 427 Gene3D - 173 199 - -
Glsi07g0299 427 SUPERFAMILY Heme-dependent peroxidases 127 228 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi07g0299 427 PRINTS Plant peroxidase signature 360 377 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g0299 427 PRINTS Plant peroxidase signature 136 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g0299 427 PRINTS Plant peroxidase signature 160 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g0299 427 PRINTS Plant peroxidase signature 400 413 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g0299 427 SUPERFAMILY Heme-dependent peroxidases 269 424 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0299 Glsi-ChrGlsi07 2007257 2009506 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0299 141 424 Peroxidase AT4G33870 40.268 3.15e-64 210