Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0296 ATGGATTTCTGGCCAGAATTTCTGGCAAGCAGTTGGAGCAGAGAATTTGTGGCCGGAGGTTTTGGGGGAATGGCTGGAGTAATCTCTGGTTATCCACTGGACACTATCCGAATATGGCAACAGAACTCGATCCCCGGTTCTGCTTTAAACATCATTAGAAATGTGGTGGCCAAGGAAGGACCAGCTGCTCTGTACCGAGGCATGGCTGCACCTTTGGCCTCTGTTAGTTTTCAGAATGCTATGGTTTTCCAAATTTATGCAGTTCTCTCAAGAGCACTTGACTCTTCTGTTTCAGCTAATGACCCTCCGTCCTACAAGAGCGTTGCTATAGGAGGATTCGCCACCGGTGCTCTACAAAGTACGTTGTTATCTCCAGTAGAATTGGTTAAAATTCGCCTTCAGCTTCAGAACACTGCCCAATCGACTGAATCATACAAAGGTCCCGTATTAGTCACTAGGAACATATGGAAAAAGGAGGGTCTTCCAGGCATATATCGAGGATTTGGCATCACTATGCTCAGAGACGCACCAGCCCATGGTGTCTACTTCTGGGCATACGAATATATGAGGGAACAACTGCACCCAGGTTGCAGAAAAAGTGGTGAAGAAAGCTTGTGTACCATGTTAACAGCAGGAGGATTAGCTGGGGTAGTGAGTTGGATTAGCTCCTACCCTTTAGATGTTATAAAGACAAGACTTCAGGCTCAAACACCATCTTCACTGAAATATAAAGGCAGTTTGGATTGCCTCGTAAAGAGCATTAAAGAAGAAGGACACCTTGTGTTATGGCGGGGTTTAGGAATTACTGTTGGCAGAGCGTTTGTAGTGAATGGTGCTATATTTGCTGCATATGAGATTGCTTTGAGGTGCCTCTCTAGCAATAGAAGTATTCAAATGGGATAA 903 0.4507 MDFWPEFLASSWSREFVAGGFGGMAGVISGYPLDTIRIWQQNSIPGSALNIIRNVVAKEGPAALYRGMAAPLASVSFQNAMVFQIYAVLSRALDSSVSANDPPSYKSVAIGGFATGALQSTLLSPVELVKIRLQLQNTAQSTESYKGPVLVTRNIWKKEGLPGIYRGFGITMLRDAPAHGVYFWAYEYMREQLHPGCRKSGEESLCTMLTAGGLAGVVSWISSYPLDVIKTRLQAQTPSSLKYKGSLDCLVKSIKEEGHLVLWRGLGITVGRAFVVNGAIFAAYEIALRCLSSNRSIQMG 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0296 300 Gene3D Mitochondrial carrier domain 12 298 IPR023395 -
Glsi07g0296 300 Pfam Mitochondrial carrier protein 11 93 IPR018108 -
Glsi07g0296 300 Pfam Mitochondrial carrier protein 205 293 IPR018108 -
Glsi07g0296 300 Pfam Mitochondrial carrier protein 105 193 IPR018108 -
Glsi07g0296 300 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 10 291 - -
Glsi07g0296 300 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Glsi07g0296 300 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Glsi07g0296 300 PRINTS Mitochondrial carrier protein signature 212 234 IPR002067 GO:0055085
Glsi07g0296 300 PRINTS Mitochondrial carrier protein signature 165 183 IPR002067 GO:0055085
Glsi07g0296 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Glsi07g0296 300 SUPERFAMILY Mitochondrial carrier 11 285 IPR023395 -
Glsi07g0296 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 92 IPR018108 -
Glsi07g0296 300 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0296 Glsi-ChrGlsi07 1995275 1997207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0296 1 291 Antiporters AT1G79900 67.123 8.32e-135 382
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0296 07 1995275 1997207 Glsi07g0296 07 1995275 1997207 ECH