Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0277 ATGATGAACCCAAAGAATTCGATTTCACAGATTAAGCGACTAATTGGTAGACAATTCTCTGATCCAGAATTGCAGCGGGATCTCAAGTCTTTCCCTTTTGTTGTCACTGAAGGGCCCGATGGCTATCCATTAATTCATGCGCGGTATTTGGGTGACTCCAAAACATTTACACCTACACAAATGTTGGGAATGCTGTTGTCAAATCTCAAAGGCATAGCTGAGAAAAATCTGAATGCAGCTGTAGTTGATTGTTGCATTGGAATTCCAGTTTATTTCACTGATCTTCAGAGAAGGGCAGTCTTGGATGCAGCCACCATTGCTGGTTTACACCCGCTTCACCTGATACATGAAACAACTGCAACTGCCTTGGCTTATGGAATTTACAAGACAGATCTTCCTGAAAATGATCAATTGAATGTTGCCTTTGTCGACATTGGACATGGCAGCATGCAAGTGTGTATTGCTGGCTATAAGAAGGGGCAGCTGAAGGTATTGGCTCATTCATATGATAGGTCTCTGGGTGGTAGGGATTTTGATGAGGTTTTGTTCCAGCACTTTGCTGCAAAGTTTAAGGAAGAGTTCAAGATTGATGTTTACCAGAATGCCAGGGCTTGTCTCAGGCTGAGATCTGCTTGTGAGAAGCTGAAGAAGATGCTTAGCGCAAATCCTGAGGCACCTCTGAACGTTGAGTGCTTAATGGATGATAAGGATGTCAGGAGCTTCATCAAGCGTGATGAATTTGAGAAACTAAGTGTTCCAATTTTGGAACGTGTGAAGAAACCTTTGGAGAAGGCACTTGCTGAAGCAGGTCTTACCGTTGAGAATGTCCACATGGTTGAGTTGGTCGGTTCAGGTTCTCGTGTACCAGCTGTAAACAAAATATTGACAGAGTTTTTCAAGAAGGAACCTAGGCGGACAATGAATGCAAGTGAGTGTGTTGCCAGGGGTTGTGCCTTGCAATGCGCAATTCTTAGTCCAACATTTAAAGTACGGGAATTTCAGGTCAATGAAAACTTTCCTTTCCCAATTTCTCTGTCATGGAAAGGTTCTGGTCCGGATGTACAAGATAGTGGACCAGATAACCAGCTGAGCACTGTTGTTTTTTCCAAGGGAAATGCCATACCAAGTGTCAAGGCTCTGACATTTTACAGGTCAGGAACATTTTCTGTTGATGTACAGTATGCTGATGTGAGTGAGCTGCAAACACCTCCAAAGATCAGCACATATACTATTGGTCCTTTTCCAACTGCAAAAGTAGAAAGGGCAAAAGTTAAAGTGAAAGTACGCTTGAATCTGCATGGAATTGTATCTGTTGAGTCGGCAATTCTCCTGGAGGAGGAAGAAGTTGAGGTTCCAGTGTCCAAAGAACCATCAGGAGAAGATACCAAGATGGATACTGATGAAGCTCCGTCTGATGCTGGTGCACCTCCAAGCTCCAATGATGCTGACATCAATATGCAAGATACTAAGGCTACTGCTGATGCCCCTGGGGCTGAAAATGGCAACCCTGCAACAGGAGATAAGCCTGTGCAAATGGATACTGATACAAAGGTTGAGGCTCCAAAGAAAAAGGTCAAGAAGACAAACGTACCTGTATCAGAGTTGGTTTATGGAGCAATGGGTCCTACAGATGTCCAGAAAGCTGTAGAGAAGGAGTTTGAAATGGCTTTGCAAGATCGTGTGATGGAAGAAACAAAAGATAAGAAAAATGCAGTTGAGGCTTATGTTTATGACATGAGAAACAAGCTCAATGACAAATACCAAGAGTTTGTCACTGCTTCAGAGAGAGAGGAGTTTACTGCTAAACTTCAGGAGATGGAAGACTGGTTATATGATGATGGTGAAGATGAAACTAAAGGTGTATATATTGCCAAACTTGACGAACTTAAAAAGCAAGGTGATCCAATTGAAGAGCGTTATAAGGAATACATGGAGAGGGCCCCGGTAACTGATCAGTTCATCTATTGTATAAATAGTTATAGAGAAGCTGCAATGTCAAATGATCCCAGATTTGATCACATTGACATTTCCGAGAAGCAGAAGGTCCTCAACCAATGTGTTGAAGCTGAGGCTTGGTTTAGGGAGAAGAAGCAGCAGCAGGACTCACTTCCAAAATATGCCAACCCTGTTCTCTTTTCAGCTGAAGTGAGAAGGAAAGCCGAGGCAGTTGATAGGTTCTGTAAGCCAATTATGACGAAACCAAAGCCAGCCAAGCCAGCTACTCCAGAAGCCCCAGCAACCCCGCCTCCTCAGGGTGGTGAGCAGCAGCAACCTCAAGGGGACGTTAATACCAGCCCTAATGAGAATGCAGGGGACAGCGCTAGTGACGCCCCACCAGCGTCTACTGAACCAATGGAGACTGACAAGTCAGAGAATACAGGCTCTACATAA 2391 0.4396 MMNPKNSISQIKRLIGRQFSDPELQRDLKSFPFVVTEGPDGYPLIHARYLGDSKTFTPTQMLGMLLSNLKGIAEKNLNAAVVDCCIGIPVYFTDLQRRAVLDAATIAGLHPLHLIHETTATALAYGIYKTDLPENDQLNVAFVDIGHGSMQVCIAGYKKGQLKVLAHSYDRSLGGRDFDEVLFQHFAAKFKEEFKIDVYQNARACLRLRSACEKLKKMLSANPEAPLNVECLMDDKDVRSFIKRDEFEKLSVPILERVKKPLEKALAEAGLTVENVHMVELVGSGSRVPAVNKILTEFFKKEPRRTMNASECVARGCALQCAILSPTFKVREFQVNENFPFPISLSWKGSGPDVQDSGPDNQLSTVVFSKGNAIPSVKALTFYRSGTFSVDVQYADVSELQTPPKISTYTIGPFPTAKVERAKVKVKVRLNLHGIVSVESAILLEEEEVEVPVSKEPSGEDTKMDTDEAPSDAGAPPSSNDADINMQDTKATADAPGAENGNPATGDKPVQMDTDTKVEAPKKKVKKTNVPVSELVYGAMGPTDVQKAVEKEFEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYQEFVTASEREEFTAKLQEMEDWLYDDGEDETKGVYIAKLDELKKQGDPIEERYKEYMERAPVTDQFIYCINSYREAAMSNDPRFDHIDISEKQKVLNQCVEAEAWFREKKQQQDSLPKYANPVLFSAEVRRKAEAVDRFCKPIMTKPKPAKPATPEAPATPPPQGGEQQQPQGDVNTSPNENAGDSASDAPPASTEPMETDKSENTGST 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0277 796 MobiDBLite consensus disorder prediction 727 796 - -
Glsi07g0277 796 FunFam Heat shock 70 kDa protein 4 174 257 - -
Glsi07g0277 796 FunFam Heat shock 70 kDa protein 4 54 149 - -
Glsi07g0277 796 FunFam Heat shock 70 kDa protein 14 331 538 - -
Glsi07g0277 796 FunFam Heat shock protein ssb1 9 64 - -
Glsi07g0277 796 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 328 573 IPR029047 -
Glsi07g0277 796 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 331 537 IPR029047 -
Glsi07g0277 796 MobiDBLite consensus disorder prediction 448 468 - -
Glsi07g0277 796 FunFam Heat shock 70 kDa protein 4 540 650 - -
Glsi07g0277 796 SUPERFAMILY Actin-like ATPase domain 2 129 IPR043129 -
Glsi07g0277 796 SUPERFAMILY Actin-like ATPase domain 139 324 IPR043129 -
Glsi07g0277 796 MobiDBLite consensus disorder prediction 735 752 - -
Glsi07g0277 796 Pfam Hsp70 protein 2 641 IPR013126 GO:0005524|GO:0140662
Glsi07g0277 796 MobiDBLite consensus disorder prediction 753 776 - -
Glsi07g0277 796 MobiDBLite consensus disorder prediction 448 525 - -
Glsi07g0277 796 CDD HSPA4_like_NDB 2 325 - -
Glsi07g0277 796 Gene3D - 541 650 IPR029048 -
Glsi07g0277 796 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 662 739 IPR029048 -
Glsi07g0277 796 Gene3D Actin; Chain A, domain 4 174 257 - -
Glsi07g0277 796 PANTHER HSC70CB, ISOFORM G-RELATED 1 788 - -
Glsi07g0277 796 Gene3D - 58 318 - -
Glsi07g0277 796 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 541 640 IPR029048 -
Glsi07g0277 796 Gene3D - 130 304 - -
Glsi07g0277 796 Gene3D - 2 57 - -
Glsi07g0277 796 PRINTS 70kDa heat shock protein signature 84 104 - -
Glsi07g0277 796 PRINTS 70kDa heat shock protein signature 307 327 - -
Glsi07g0277 796 PRINTS 70kDa heat shock protein signature 276 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0277 Glsi-ChrGlsi07 1872566 1877344 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0277 2 440 Calmodulin-binding Proteins AT1G16030 32.960 7.07e-73 249