Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0275 ATGGATGACAATGAGGATGATGCAAAGTGTCCCCCTAACCCATACTACCAAGGTTACGGTTATTTGAATCATCAGAAACTTCCAGTTGGAATTTCTCCACATTCTCAGTCAGTTACAAATGAATATGGTGAAGATTATAATGATTATGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGACAAAGAACAGTTAGGACAGGAAGATGATGATGATGTTGAACAAGGTAACAGTATTCAGCCTTCCCAAAAAGATGTTGATGACAGTGATGATGAGGAAAACGATGAGAATGGGGATGAAAATGATGATTACAGTGATGATGAGGAAATTAAGCAGAAAAGCTACACCATGAGGATTGAAGATGATTTAGAATGGCACCCAAAAAAGCGAAAGCTGAAAAGTTTGATTTCAACATATGAATTTGCGCCTCGTGTACCTACACCATCAGCTGCAGCTCCTTCAGCCCCTAAACTATCTTTTGGTGGCAGGAATTCCCTTACTGACTGGACTGAGCATGAGACATTTGTTCTTCTTGATGCTTGGGGTGACCGATTTATTCAACACGGGAGGAAGAGTCTTCGGTCTGAGGAATGGCAAGAAGTTGCAGTAAAAGTGTCAGAAGTTTCAAAAATTGAAAGGACAGATACTCAGTGTAGGAATCGTCTTGATACATTAAAGAAAAAATACAAAAAGGAGAAGATCAAATTAGCAGAAATGGGTGGTGGGGCTAGCAAATGGGTTTATTTTAAAAGGATGGATAAGCTGATGTCTTCTCCACCACAACAAGCAGGCCTATCTTGTGGTTTGGACTCGGGAGAGTATGTTTTTATGAACCCTAGAGTTTATTTGAATCGCGCAAATGGATTTGATGAAATGAGGGATAGTCCAGGGAATTCAGAGTCTACTGGTGAGGAAGGTCTGGATGGACTTCAATCAAAGAAACGAAAGTATAGAAGAAACAATGATGAAACTTCTTCCTTCAAATTGCTTGCTGATTCCATTCAGAAATTCAGTGACATATATGAGAAAATTGAAAATAATAAAAGGCAGCAGATGGTGGAGCTGGAAAAGATGAGGATGGATTTTCATAAGGAATTGGAAATGCAAAAGAGGCAGATTTTAGAGAAAGTGCAGAGCGAGATTGCAAAACTACAGCAGAGAGATGAGGAGGAGAATGATGATTCTGCTGAGAATGGTATGTGA 1239 0.3979 MDDNEDDAKCPPNPYYQGYGYLNHQKLPVGISPHSQSVTNEYGEDYNDYEEEEEEEEEEEEEEEEEEEEEEEDKEQLGQEDDDDVEQGNSIQPSQKDVDDSDDEENDENGDENDDYSDDEEIKQKSYTMRIEDDLEWHPKKRKLKSLISTYEFAPRVPTPSAAAPSAPKLSFGGRNSLTDWTEHETFVLLDAWGDRFIQHGRKSLRSEEWQEVAVKVSEVSKIERTDTQCRNRLDTLKKKYKKEKIKLAEMGGGASKWVYFKRMDKLMSSPPQQAGLSCGLDSGEYVFMNPRVYLNRANGFDEMRDSPGNSESTGEEGLDGLQSKKRKYRRNNDETSSFKLLADSIQKFSDIYEKIENNKRQQMVELEKMRMDFHKELEMQKRQILEKVQSEIAKLQQRDEEENDDSAENGM 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0275 412 Coils Coil 39 80 - -
Glsi07g0275 412 MobiDBLite consensus disorder prediction 44 87 - -
Glsi07g0275 412 MobiDBLite consensus disorder prediction 29 43 - -
Glsi07g0275 412 MobiDBLite consensus disorder prediction 300 334 - -
Glsi07g0275 412 MobiDBLite consensus disorder prediction 1 123 - -
Glsi07g0275 412 Coils Coil 353 406 - -
Glsi07g0275 412 FunFam trihelix transcription factor ASIL2 181 243 - -
Glsi07g0275 412 Gene3D - 181 243 - -
Glsi07g0275 412 MobiDBLite consensus disorder prediction 319 334 - -
Glsi07g0275 412 Pfam Myb/SANT-like DNA-binding domain 180 267 IPR044822 -
Glsi07g0275 412 ProSiteProfiles Myb-like domain profile. 181 238 IPR001005 -
Glsi07g0275 412 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 170 403 IPR044823 -
Glsi07g0275 412 MobiDBLite consensus disorder prediction 98 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0275 Glsi-ChrGlsi07 1869093 1870331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0275 181 409 Trihelix Transcription Factor Family AT1G54060 34.191 6.52e-26 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi07g0275 Myb_DNA-bind_4 1.5e-21 CL0123