Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0273 ATGTTTGAGAGTTTGACGAAGAAAGAGGATCCTTGTATTAATCCGAGTACTTTTGCAGAACAAATGGGCGTCAACTCCAATAGAGTGGAAAACTTTGATTGCTATGAAACCAGTGTCAGAATCCAAGGTGAGATACCAATGCCAGCATTAGAAATCCACAAAGTTCGCTTGCCACCGGAGCAAACCACACTGCAGAAACTAAGGCACAGGATCTCAGAGATATTCTTCCCAGATGATCCACTCTACAGATTCAAGAATCAAACGCGGTTCAAGAAATTGCTTCTGGGTCTTCAATATCTGTTCCCCATTTTCCAGTGGGGGCCTGAGTACAATCTTAGGCTTCTCCGTTCTGATATCATCTCTGGCCTCACCATTGCTAGCTTGGCCATTCCTCAGGGAATCAGCTATGCAAAGCTTGCAAATTTGCCGCCCATAATTGGACTGTATTCTAGCTTTGTGCCTCCGTTGATATATTCCCTGCTTGGAAGTTCTAGACATCTTGGTGTTGGCCCTGTTTCAATTGCATCTTTGGTTATGGGATCAATGTTAAGCGAGACAGTTTCTAATACTCAAGATCCAATTCTCCATTTGAAATTGGCTCTGACTGCCACTTTCTTTGCTGGTTTATTCCAAGCTTCTCTGGGTATATTGAGATTAGGCTTTGTAATTGATTTTCTCTCAAAAGCGACGCTAGTTGGGTTCATGGCCGGTGCAGCAGTCATTGTGTCACTGCAGCAGCTTAAAGGGTTACTTGGAATAGTGCACTTCACTAACAAGATGCAAATAGTTTCTGTACTGACCTCTGTATTTGAAGAGAAAAAGGAGTGGTCATGGCAAACCATTGTACTGGGAATTGGCTTCCTTGCCTTCCTGCTGGCAACAAGGCACATAAGCTTGAAGAAACCGAAACTATTCTGGGTTTCAGCAGCTGCCCCGTTGACATCAGTTATTCTGTCAACTCTGTTGGTTTTTTGTCTTAAAAATAAGACTCATGGAATTGCAATCATCGGGCACCTGCCAAAGGGCATTAATCCACCATCATCAAACATGTTATACTTCGACGGTCCTTATTTGGGACTTGCTATCAAAACCGGCATTGTGACTGGGATTTTGGCTCTCACTGAAGGAATTGCTGTTGGAAGAACATTTGCTGCACTTGAGAACTATCAAGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAACATAGCTGGCTCTTGTTCTTCATGCTATGTCACAACAGGATCTTTTTCTCGATCCGCTGTTAATTATAATGCTGGAGCGCAGACAGCAGTTTCAAATATTATAATGGCCGCAGCTGTTCTTGTGACCCTTCTGTTTCTCATGCCTCTGTTTTATTACACACCGAATGTTGTCTTAGCAGCCATTATCATCAGTGCTGTGATTGGGCTAATAGATTATCAAGCTGCATATAAATTGTGGAAGGTTGACAAGCTGGATTTCTTGGCTTGTTTTTGCTCTTTTTGTGGTGTCGTGTTCATCTCAGTACCTCTAGGCCTTGGTATAGCGGTGGCAATATCAGTGTTCAAGATCCTACTTCACGTGTCTCGGCCAAACACCGCGGTTTTGGGGAACATACCAGGAACCCAAATATACCATAACCTTAACCAATATAAAGAAGCTTCAAGCATTCCTTCATTTCTCATTCTAGCTGTTGAGTCGCCTATTTACTTCGCCAATTCAACTTACCTGCAAGAGAGGATACTGAGATGGGTTCGAGAGGAGGAAGAGCGCGTAAAAGCAAACGAAGAAAGTACATTGAAGCGTGTAATTTTAGACATGACAGCTGTGACTGCCATAGACACAAGTGGGATTGACACTCTATGTGAACTTCAAAGGATGCTGGAGAAAAGATCGCTTCAGCTTGTATTAGCAAATCCTATTGGCGATGTGATGGAAAAGTTACATCAGTCAAAAGTTTTGGATTCCTTTGAGTTGAAAGGACTCTATCTCACGGTGGGAGAAGCTGTGGCTGACATTTCGTTAACCTGA 2019 0.4289 MFESLTKKEDPCINPSTFAEQMGVNSNRVENFDCYETSVRIQGEIPMPALEIHKVRLPPEQTTLQKLRHRISEIFFPDDPLYRFKNQTRFKKLLLGLQYLFPIFQWGPEYNLRLLRSDIISGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLSETVSNTQDPILHLKLALTATFFAGLFQASLGILRLGFVIDFLSKATLVGFMAGAAVIVSLQQLKGLLGIVHFTNKMQIVSVLTSVFEEKKEWSWQTIVLGIGFLAFLLATRHISLKKPKLFWVSAAAPLTSVILSTLLVFCLKNKTHGIAIIGHLPKGINPPSSNMLYFDGPYLGLAIKTGIVTGILALTEGIAVGRTFAALENYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNYNAGAQTAVSNIIMAAAVLVTLLFLMPLFYYTPNVVLAAIIISAVIGLIDYQAAYKLWKVDKLDFLACFCSFCGVVFISVPLGLGIAVAISVFKILLHVSRPNTAVLGNIPGTQIYHNLNQYKEASSIPSFLILAVESPIYFANSTYLQERILRWVREEEERVKANEESTLKRVILDMTAVTAIDTSGIDTLCELQRMLEKRSLQLVLANPIGDVMEKLHQSKVLDSFELKGLYLTVGEAVADISLT 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0273 672 FunFam Sulfate transporter 31 526 672 - -
Glsi07g0273 672 Pfam Sulfate permease family 115 494 IPR011547 GO:0016020
Glsi07g0273 672 CDD STAS_SulP_like_sulfate_transporter 547 662 - -
Glsi07g0273 672 ProSitePatterns SLC26A transporters signature. 144 165 IPR018045 GO:0008271|GO:0008272
Glsi07g0273 672 ProSiteProfiles STAS domain profile. 546 669 IPR002645 -
Glsi07g0273 672 Gene3D STAS domain 526 670 IPR036513 -
Glsi07g0273 672 SUPERFAMILY SpoIIaa-like 551 667 IPR036513 -
Glsi07g0273 672 PANTHER SULFATE TRANSPORTER 64 667 IPR001902 GO:0016020|GO:0055085
Glsi07g0273 672 Pfam STAS domain 547 665 IPR002645 -
Glsi07g0273 672 NCBIfam sulfate permease 102 665 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0273 Glsi-ChrGlsi07 1856188 1860314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0273 22 672 Inorganic Solute Cotransporters AT3G15990 74.962 0.0 1017