Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0266 ATGGATCAGATACTGACAATAATATGGGATGCTACGAAGTGCTTGTGTGGTTGTGTCAATGACCAAGCTGTTTATATTTATGATTTGGAAGAGAATCTAAAATCATTGAAAGATAAATGGGAAGGCCTTCAAAGCACGCAACGAGATGTGCAGAGAGAAGTTGATGAAGCTGAGAAAACCGGAGAAATGAAAAGGACGGAACAAGTCACTACATGGCTGCAGAAAATTGAAGACATTCAAAAGGGGGCAGCATTAGAAGCATCACAAGATGATGATGTTGAAAAATGGAAATCTGTTGAGAGGATTTCAATCATTAGAAGTGGTGGTGATTTCCATGTACCAAAAATATGGCATGGGGATTGGTTTGTTAGATGCATATCATTGCAGATTGGCTTACTCATTGAGTATTTGGGGATGATGATTGGTTTTAGGGAGATTACTTCTGCTATAGGCTGCATAAATCTGCTTATTCCTCTTTCCGACCTTTTCCTCCTTTCTCGTGACGTTCAACCCCATTGCCATCCCTATGCCAACACCAAGGTGACACTTTCTGTTCCTCTTAAGCTTTTCCGTCTTGGCCTGTTATCTCTTTTCGTTACTGTGCTATTCCTTCTCAGAATGAGATATTTCTTATCGATGCTATGCTTCTCTACCTTCCTGTACGCTATTTCTTCTTTGAGCACAGATAGGATCACTCTGCTCTCACTCTTGACGCATTGGACTTTTGTGCCTCCTCCCATAAACTCGAGCTGGAATGCCTCTGATCCTACTCCATGCTCATGGGTAGGAGTCCAGTGTGACAATGCCCACAATGTAGTTTCCCTTAATTTAACTTCTTATTCCATTTTGGGCCAGTTAGGGCCTGAAGTAGCACAGCTGAGTCACTTGCAGACTCTTGTGTTGTATTCTAACAGTCTCTCAGGAAGAATACCCCCTGAGATAGGTAATTGCAGCACGCTTGAGTATTTGGATCTTTCTGCAAACAATTTTAGCGGAGAAATACCAAATGGCTTGAGCAATTGTAGCATGCTTCGGCACTTGGATCTTTCTGAAAACAGCTTTAGGGGACAAATTCCAAATAGCTTGAAAAACTTGCATAATTTGCAGTATTTCAACTTCCATTCCAATCTACTGAGCGGTGAAGTTCCTGATTACTTGTTTGAAATTCCTCACTTAGAGCATGTGGATCTGGAAAATAACAATCTGAGTGGTCCCATCCCTATGAATATTGGCAACAGCACCAAGCTTTTGTGGCTGCATTTGTACAATAATCAGTTGTCTGGGACAATTCCCTCATCCATTGGAAACTGTAGTAGATTAGAGGAACTGTTTCTGGGTGAGAACCAATTACGGGGGATTTTTCCTGAAAGTCTCAACAACCTCGAGAATCTTGTTTACTTTGATGTCAATCATAATAATCTTGTGGGAACAATTCCATTAGGTTCTGGCAATTGTAAAAGTTTATCTTTCTTGGATTTGTCAGTCAATGTATTCAATGGAGGTATTCCTTCGGGATTGGGGAATTGTAGTGGTTTGACAAAATTGTTTGCTGTCAATAGCAACTTAGTAGGCGGTATTCCATCTTCCTCAGGCCTGCTAAGTCAACTTACTATTCTTCGCCTTCCTCGGAACCATTTGTCTGGACAAATACCTCCAGAAATTGGTAGATGCAAGTGTTTGCAAGAGCTGAACTTATGTGCCAATCAACTCCAGGGGGAAATTCCTAGTGAACTGGGAATGCTAACTGGATTGCAGGATCTTCGATTGTATTCCAACCAGTTGACGGGTGAGATCCCTATTGGCATATGGAAAATTCCAAGTCTTCAGTATATCCATTTGTACAATAATAGCTTCTATGGGGAGCTACCTTTTGAAGTCACAGAGCTAAAGCAGCTACGAAATTTCACCTTGCATAACAACCACTTCTCTGGAGCTATACCTCAAAGCTTAGGAATTAACAGTGGTTTAGTGAATTTGGACTTCACAAACAACAAATTCTCCGGTCAAATCCCGCCCAATCTTTGTTCTGGAAAGAAATTATTGAGACTGGCTATGGGTATTAATCAACTGCAAGGTAGCATACCTCCTGACATAGGAAGTTGTACAACTCTCACAAGATTGATTCTCAAAGCAAATAACTTCACAGGAGCTCTTCCTGATTTTGAGAGTAATATGAATCTGGTATACATGGACATCAGCAATAACAGCATCAGCGCATCAATTCCCTCAAGTGTAGGAAACTGCAAAAACCTCACTAGCGTTGATTTTTCCATGAACAAACTTGAGGGGCTTATACCCTCTGAGTTAGGAAATCTTGTGAATCTTCGCAGGTTGAAGCTTTCTGACAATGACTTGGAAGGTCCTTTGCCAGCCCGCCTGTCACGTTGTAACAAAATGGAACACTTTGATGTGGGATTCAATTTCCTAAATGGTTCATTGCCATCAAGTTTGAGCAACTGGACCGGGCTGTCCACTTTAATTTTAAGAGAGAATCATTTTACAGGGGGTATCTCAGCATTCTTGTCAAATTTTGAAAAGCTTTCTGAGCTACAACTTGAGGGGAATTTGTTTGGGGGTGAAATTCCCAAATCAATTGGAAAATTGCAGAATCCGCTCTATGGGTTGAATCTTAGTGCTAATGGGTTGACAGGTGAGGTTCCTCCAGAGATTGGAAAACTGAAAATGCTACTAAGACTGGATCTCTCCCATAACAATCTGACGGGAAGCATAAAAGTCCTTGAACAGCTGTCTTCATTGGTTGAAGTCAACATCGCCTTCAATTCCTTTGAGGGTCCTGTACCGGATACACTGACGAGGTTGCTGAATTCTTATCCAGCATCATTCTCGGGAAATCCCGACTTATGTGTTAGTTGTTCAACCTTAGATAGCCTAAATTGCCCCAAGAATGTCAGTCTGAAGCCTTGTGGCTACATATCAAGACATGGGAAAGGATTAAGTAAAATTAAAATCACAATGATAGCACTTGGATCCTCATTTTTTGGTATTTTTCTGCTGCTAGGACTAGTTTTCATGTTTCTCTCTGGCAGAAGATCTAAGCAGGATGTCCTAATCCTTTCCAGACATCAGTCCTCTCCCTCTCTCAAGAAAGTAATGAAGGCTACAGAGAACCTAAGTGATCGGTTTATTATTGGCAGAGGAGCCCATGGAGTCGTTTACAAAGTTTCACTAGGTCCAGAAAATATTTTTGCTGTAAAGAAACTTGCATTTAACCAGAAGGAAGGGCAGAGCAAAAGCATGAGCAGAGAACTTGAAACCATAGGGAAGATCAGGCATCGAAATCTGGTGATATTGAAAAACTTCTGGTTGAGAAAGGACTATGGTTTGATATTTTACAACTACATGGAAAATGGAAGCCTTCATGATGTTTTGCATGAAATGAATCCAGCACCATCCATAGAATGGAATGTTCGGTATAAGATAGCAGTGGGAATTGCACATGGGCTGGCATATCTCCATCATGACAGTGATCCTATCATAGTGCACAGAGACATCAAACCAAAGAATATACTTTTAGATTCCGATATGGAGCCGCATATCGCTGATTTTGGGATTGCCAAGGTTTTGGATCACTCCCTTGCTTCAACGCAGTCTGCAGCAGTTCCTGGTACAGTCGGGTATATTGCACCAGAGAATGCATATACTACATTAGTGAGCAGGAAATCCGATGTATATAGTTATGGGGTAGTTTTGGTGGAGCTAATAACCAGAAAGAAGGTGCTGGATGCTTCATTTATGGAGGGAACAGATGCAGTGGGGTGGGTTAAATCTGTATGGGATGAAACAGGAGAAATTGATAGTATTGTTGATTCAAGCCTTGCAGAGGAGCTTTCGGATTCAAATGTAAGGGAACAGGTTGTACAAGTGCTTTTGGTGGCATTGGAATGCACCGAGAAGGATCCAAGCAAGAGGCCAACGATGAGAGAAGTGATCAAGCAATTGATTATTAGAAGCACATCTAGGGGCCACAGGTAG 3993 0.4145 MDQILTIIWDATKCLCGCVNDQAVYIYDLEENLKSLKDKWEGLQSTQRDVQREVDEAEKTGEMKRTEQVTTWLQKIEDIQKGAALEASQDDDVEKWKSVERISIIRSGGDFHVPKIWHGDWFVRCISLQIGLLIEYLGMMIGFREITSAIGCINLLIPLSDLFLLSRDVQPHCHPYANTKVTLSVPLKLFRLGLLSLFVTVLFLLRMRYFLSMLCFSTFLYAISSLSTDRITLLSLLTHWTFVPPPINSSWNASDPTPCSWVGVQCDNAHNVVSLNLTSYSILGQLGPEVAQLSHLQTLVLYSNSLSGRIPPEIGNCSTLEYLDLSANNFSGEIPNGLSNCSMLRHLDLSENSFRGQIPNSLKNLHNLQYFNFHSNLLSGEVPDYLFEIPHLEHVDLENNNLSGPIPMNIGNSTKLLWLHLYNNQLSGTIPSSIGNCSRLEELFLGENQLRGIFPESLNNLENLVYFDVNHNNLVGTIPLGSGNCKSLSFLDLSVNVFNGGIPSGLGNCSGLTKLFAVNSNLVGGIPSSSGLLSQLTILRLPRNHLSGQIPPEIGRCKCLQELNLCANQLQGEIPSELGMLTGLQDLRLYSNQLTGEIPIGIWKIPSLQYIHLYNNSFYGELPFEVTELKQLRNFTLHNNHFSGAIPQSLGINSGLVNLDFTNNKFSGQIPPNLCSGKKLLRLAMGINQLQGSIPPDIGSCTTLTRLILKANNFTGALPDFESNMNLVYMDISNNSISASIPSSVGNCKNLTSVDFSMNKLEGLIPSELGNLVNLRRLKLSDNDLEGPLPARLSRCNKMEHFDVGFNFLNGSLPSSLSNWTGLSTLILRENHFTGGISAFLSNFEKLSELQLEGNLFGGEIPKSIGKLQNPLYGLNLSANGLTGEVPPEIGKLKMLLRLDLSHNNLTGSIKVLEQLSSLVEVNIAFNSFEGPVPDTLTRLLNSYPASFSGNPDLCVSCSTLDSLNCPKNVSLKPCGYISRHGKGLSKIKITMIALGSSFFGIFLLLGLVFMFLSGRRSKQDVLILSRHQSSPSLKKVMKATENLSDRFIIGRGAHGVVYKVSLGPENIFAVKKLAFNQKEGQSKSMSRELETIGKIRHRNLVILKNFWLRKDYGLIFYNYMENGSLHDVLHEMNPAPSIEWNVRYKIAVGIAHGLAYLHHDSDPIIVHRDIKPKNILLDSDMEPHIADFGIAKVLDHSLASTQSAAVPGTVGYIAPENAYTTLVSRKSDVYSYGVVLVELITRKKVLDASFMEGTDAVGWVKSVWDETGEIDSIVDSSLAEELSDSNVREQVVQVLLVALECTEKDPSKRPTMREVIKQLIIRSTSRGHR 1330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0266 1330 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 803 1315 - -
Glsi07g0266 1330 SMART serkin_6 1044 1322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0266 1330 SUPERFAMILY L domain-like 679 978 - -
Glsi07g0266 1330 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 1011 1120 - -
Glsi07g0266 1330 FunFam Serine/threonine-protein kinase-like protein CCR4 1121 1330 - -
Glsi07g0266 1330 Pfam Protein kinase domain 1049 1319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0266 1330 Gene3D Ribonuclease Inhibitor 383 481 IPR032675 -
Glsi07g0266 1330 SUPERFAMILY L domain-like 484 762 - -
Glsi07g0266 1330 Pfam Leucine rich repeat N-terminal domain 227 267 IPR013210 -
Glsi07g0266 1330 Pfam Leucine rich repeat 416 474 IPR001611 GO:0005515
Glsi07g0266 1330 Pfam Leucine rich repeat 726 785 IPR001611 GO:0005515
Glsi07g0266 1330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1166 1178 IPR008271 GO:0004672|GO:0006468
Glsi07g0266 1330 Gene3D Ribonuclease Inhibitor 729 960 IPR032675 -
Glsi07g0266 1330 FunFam Leucine-rich repeat receptor protein kinase EMS1 480 560 - -
Glsi07g0266 1330 ProSiteProfiles Protein kinase domain profile. 1044 1322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0266 1330 Gene3D Ribonuclease Inhibitor 482 726 IPR032675 -
Glsi07g0266 1330 SUPERFAMILY L domain-like 229 527 - -
Glsi07g0266 1330 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 561 650 - -
Glsi07g0266 1330 ProSiteProfiles Leucine-rich repeat profile. 895 917 IPR001611 GO:0005515
Glsi07g0266 1330 FunFam Leucine-rich repeat receptor protein kinase EMS1 384 479 - -
Glsi07g0266 1330 SMART LRR_typ_2 629 653 IPR003591 -
Glsi07g0266 1330 SMART LRR_typ_2 461 485 IPR003591 -
Glsi07g0266 1330 SMART LRR_typ_2 581 605 IPR003591 -
Glsi07g0266 1330 SMART LRR_typ_2 414 437 IPR003591 -
Glsi07g0266 1330 SMART LRR_typ_2 893 916 IPR003591 -
Glsi07g0266 1330 SMART LRR_typ_2 533 557 IPR003591 -
Glsi07g0266 1330 SMART LRR_typ_2 438 460 IPR003591 -
Glsi07g0266 1330 SMART LRR_typ_2 772 796 IPR003591 -
Glsi07g0266 1330 SMART LRR_typ_2 293 317 IPR003591 -
Glsi07g0266 1330 SMART LRR_typ_2 365 389 IPR003591 -
Glsi07g0266 1330 Gene3D Transferase(Phosphotransferase) domain 1 1121 1327 - -
Glsi07g0266 1330 FunFam Leucine-rich repeat receptor-like protein kinase 227 383 - -
Glsi07g0266 1330 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 678 964 - -
Glsi07g0266 1330 Pfam Leucine Rich Repeat 344 365 IPR001611 GO:0005515
Glsi07g0266 1330 Pfam Leucine Rich Repeat 320 341 IPR001611 GO:0005515
Glsi07g0266 1330 Gene3D Phosphorylase Kinase; domain 1 1011 1120 - -
Glsi07g0266 1330 ProSitePatterns Protein kinases ATP-binding region signature. 1050 1073 IPR017441 GO:0005524
Glsi07g0266 1330 Gene3D Ribonuclease Inhibitor 227 382 IPR032675 -
Glsi07g0266 1330 SUPERFAMILY Protein kinase-like (PK-like) 1019 1322 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0266 Glsi-ChrGlsi07 1783815 1793438 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0266 217 1320 Receptor kinase-like Gene Family AT1G73080 51.030 0.0 1036
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Glsi07g0266 Pkinase 1.6e-45 CL0016