Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0255 ATGGCCAAAGAAGGTCTTGGACTTGAAATCACAGAGCTAAGGTTGGGTCTTCCAGGTGGGGAACCTAGTGTGATGGAGAAGAGTGAGAAGAAGAGGGGGTTCTCGGAGATTGGTGGTGGTGGTGGTTGTGATGAAAATAGCTCCTCCGGTGACCGGAAAACGCAGACAAAGAGTCAAGTTGTGGGGTGGCCTCCGGTGTGCTCGTACCGAAGGAGAAACAGCATGAGTGAAGAAACTTCAAAAATGTACGTGAAGGTTAGCATGGATGGGGCTCCTTTCTTGCGTAAAATTGATTTGAGTATGCACAAGGGATACTCGGAGTTAGCCTCGGCCTTGGAGAAGCTCTTTGATTGCCATGGAATCGAGGAAGCATTGAAGGGTGTGGACAATTCTGAACACGTTCCCATCTATGAGGACAGGGATGGTGACTGGATGCTTGTTGGAGATGTCCCTTGGAAAATGTTTATTAATTCATGCAAGAGACTGAGGATTATGAAGAGATCGGATGCAAAGGGCTTTGGTCTGCAACCAAAAGGTTCTTTGAATTAG 549 0.4736 MAKEGLGLEITELRLGLPGGEPSVMEKSEKKRGFSEIGGGGGCDENSSSGDRKTQTKSQVVGWPPVCSYRRRNSMSEETSKMYVKVSMDGAPFLRKIDLSMHKGYSELASALEKLFDCHGIEEALKGVDNSEHVPIYEDRDGDWMLVGDVPWKMFINSCKRLRIMKRSDAKGFGLQPKGSLN 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0255 182 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 7 171 IPR003311 GO:0005634|GO:0006355
Glsi07g0255 182 FunFam Auxin-responsive protein 76 177 - -
Glsi07g0255 182 SUPERFAMILY CAD & PB1 domains 74 166 - -
Glsi07g0255 182 Gene3D - 75 177 - -
Glsi07g0255 182 MobiDBLite consensus disorder prediction 16 57 - -
Glsi07g0255 182 ProSiteProfiles PB1 domain profile. 81 169 IPR000270 GO:0005515
Glsi07g0255 182 Pfam AUX/IAA family 48 173 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0255 Glsi-ChrGlsi07 1669202 1671526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0255 79 171 B3 DNA Binding Superfamily AT4G23980 40.860 1.32e-13 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Glsi07g0255 AUX_IAA 9.8e-47 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g0255 07 1669202 1671526 Glsi06g0211 06 1428546 1431387 CCT