Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0167 ATGACCGGCGATACCACATATTCTCCGGACGACAAGACCTTGTCGCCGAGTCATAACCTCGACATCACGATAGAGGAAGGATCTCCAAACAGTGAGCAATTGCTCGAGGTTGAGGATGAGAGCAATGACCTTGGGAATGACTGTGGGCAACTATTTGAGATTGATGAAAGTGAACAGGAAGATGGGAGAGATGAAATAACCGTCGTGGATTGTTATAATGGGGAATCTCAAGTAAAAGACTACCCTCCACCAGTTGTAGGCATGGAGTTTGATACATATGATGATGCCTATAACTACTATAATAGTTATGCCAAGGAACTTGGATTTGCTATCAGGGTTAAATCTTCGTGGACCAAACGTAACAGCAAAGAGAAGCGTGGTGCCGTGCTCTGCTGCAACTGTGAGGGTTTCAAAACATCTAAGGAAGCAAATAGTCGTAGAAAAGAGACAAGAACAGGCTGTCTAGCAATGATTAGGTTAAGATTGGTGGAGTCTAATAGGTGGAGGGTGGATGAAGTCAAGCTTGAGCATAATCATTCATTTGATCCTGAGAGAGCACAAAACTCTAAATCACATAAGAGGATGGATACTGGGGCTAAAAGAAAGGTCGAGCCAACTCTAGATGTTGAAGTTCGAACAATCAAGTTATATCGAACACCAGTTGTAGAAGCATCAGGTTATGGAAGCTTAAATTCTAATGAAGGAGGAATTAACAACCATGTTAACTTTTCAAGGCATTTGAAACTTAAAAAGGGAGATGCAGAAGTTATTTCAAATTATTTCTGCCGCAGTCAATTGATGAATCCTAATTTTTTCTATGTGACAGATCTGAATGATGATGGGCACTTGAGGAACGTCTTTTGGATTGACTCTAGATCAAGGGCTGCGTATGGTTACTTTGGTGATGTGGTTGTATTTGACTCAACATGTTTGTCAAACAATTATGAGATTCCACTGGTTGCGTTTGTTGGTGTTAATCACCATGGGCAATCTATTTTGCTAGGATGTGGTCTGCTTGCAGATGAGACTTATGAAACATACATTTGGTTATTTAGGGCATGGCTGACATGTATGTCTGGTCGCCCTCCACAAACTATCATTACAAACCAGTGTAAAACTGTGCAAAGTGCAATAGCGGAGGTTTTCCCACGAGCTCACCATAAAATTTGTCTGTCACAAGTCATGCAGAGCATTCCTGGAGATTTGGCGCAGTTGCAGGAATATGACGCCTTCCAGATTGCATTGACAAAAGTGGTATATGACTCTAAGACTGTAGATGAATTTGAGGGGGCTTGGGATGATCTGACCCAACATTTTGGAATAAGCAATCACGAGAAGCTCCAAACCTTGCATGAAGAAAGGGAGCGTTGGGCCCCAGTTTATTCCAAGGACACTTTTTTTGCTGGAATTTCTCATTATGAAAAGGGTGAGTCCATGAGTCCCTTTTTCAATGGTCATGTGCATCAACAAACTTCTTTGAAAGAATTTTTTGACATTTTTGAATTAGTTCTACAAAAGAAGCATAAAGAAGAAGCTCTTTCTGATTTGGAGTCAAGAGATTCAAGCCCCTTACTGAAAACAAGATGCTACTATGAGCTGCAGCTCTCGAAATTGTACACAAATGCAATATTCAGAAAGTTCCAAGATGAGGTAGTGATGATGTCTTCTTGTTTCAGCATCACACAAAATCAAACAAATGGGCCTACGGTGACGTTCATACTTAAAGAACATGGGGGGGAAGAATCAGTGAGGGATGTAAGGAATTTCGAAGTCATGTATGATAAAGCAGGAGCTGAAGTTCGCTGTATCTGCAGTTGCTTTAACTTCAAAGGCTATCTATGTAGGCATGCATTGTGCGTCCTTAATTACAATGGTGTGGAGGAAATTCCATGTCAGTATATTTTGTCAAGATGGAGGAAGGATTATAAGCGATTGTATGTACCCCTTCTCAGCTCCAATAATGTTGATATCACCAACCCTGTTCAGTGTTACGATCATTTGTACAGACGGGCTATGCAGGTTGTTGAGGAAGGAATGATATCTCAAGATCATTATATGGTTGCCTGGCAGGCATTTAAAGAATCTTTGAATAAGGTCCGCCTTGTAGCAGACAAGATTGAATAA 2124 0.4096 MTGDTTYSPDDKTLSPSHNLDITIEEGSPNSEQLLEVEDESNDLGNDCGQLFEIDESEQEDGRDEITVVDCYNGESQVKDYPPPVVGMEFDTYDDAYNYYNSYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTSKEANSRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSFDPERAQNSKSHKRMDTGAKRKVEPTLDVEVRTIKLYRTPVVEASGYGSLNSNEGGINNHVNFSRHLKLKKGDAEVISNYFCRSQLMNPNFFYVTDLNDDGHLRNVFWIDSRSRAAYGYFGDVVVFDSTCLSNNYEIPLVAFVGVNHHGQSILLGCGLLADETYETYIWLFRAWLTCMSGRPPQTIITNQCKTVQSAIAEVFPRAHHKICLSQVMQSIPGDLAQLQEYDAFQIALTKVVYDSKTVDEFEGAWDDLTQHFGISNHEKLQTLHEERERWAPVYSKDTFFAGISHYEKGESMSPFFNGHVHQQTSLKEFFDIFELVLQKKHKEEALSDLESRDSSPLLKTRCYYELQLSKLYTNAIFRKFQDEVVMMSSCFSITQNQTNGPTVTFILKEHGGEESVRDVRNFEVMYDKAGAEVRCICSCFNFKGYLCRHALCVLNYNGVEEIPCQYILSRWRKDYKRLYVPLLSSNNVDITNPVQCYDHLYRRAMQVVEEGMISQDHYMVAWQAFKESLNKVRLVADKIE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0167 707 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 75 700 IPR031052 GO:0006355
Glsi07g0167 707 SMART 26again6 600 627 IPR006564 GO:0008270
Glsi07g0167 707 MobiDBLite consensus disorder prediction 179 200 - -
Glsi07g0167 707 Pfam MULE transposase domain 303 396 IPR018289 -
Glsi07g0167 707 MobiDBLite consensus disorder prediction 1 30 - -
Glsi07g0167 707 ProSiteProfiles Zinc finger SWIM-type profile. 589 625 IPR007527 GO:0008270
Glsi07g0167 707 Pfam FAR1 DNA-binding domain 98 182 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0167 Glsi-ChrGlsi07 1111431 1114634 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Glsi07g0167 MULE 1.9e-27 CL0219