Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0142 ATGGAGGTGCCATGGCAGAGTTGGATCTCTGATTCGGATGTAGATGATAGCGATATCTTCAGTCAATGCCACCAGAACTCATTTGATGAGGAAGAGTTCCTGAGGGAGATCCTCCACCAACCTTCCTTATCTTCTGAAACTGAAAGTCACTCTTCCACTATTCAAAACAATTCCATCCCCAAACTTGCTTCTTCACATAAGAAACCCTCATCCTCATCTTCTCCATCAACTTATATTCTATCCTTCGATAATTCGACTCTAATACCAGCCGCTACCCACGATACTAATTATAGAAAACATCGTGACTCTGCCCCCTTCAATCCTACTCATAAGCAATTAGATATTACTGAACCCACACTTTCTTCCCATTTACCCACAAAACCGGGCCTAAAAAACCATAACTCTTCTCTCACTGATCAGCCAAAGGCCAATCAACGATCAAAGAAGGCTAGAAGTTCCTCTGAGGCACTAGATCACATAGTGGCCGAGAGAAATAGGAGACAGCATCTCAGAGAGAAGTTTATAGCACTTGCAGCTACTATTCCTGGTTTGAAGAAGATTGACAAGGCGTCTATACTTAGCGAAGCTGTCAAACACATGAAACAACTTCATGAACGTGTAAAAGAGTTAGAGCAACAAAGCAAGAAGACAAGTGTTGATGAAGAAACAACCTCTGATTGTGAAATGATGAGCTCTCGTGATTGCTATAGACTTAATGAGGCGCTCCCCGAAGTTGAAGCAAGACTCTTACACAAACAAATACGCATCAGAATTCACTGTGAGAAACATCCCGGCATAATGCTCAAAATATTGGCCCACCTTCAAACTCTTCATTTCTCTGTAATCAGTAATAACGTCGTCCCATTTGGGAATTCCACTCTTGACATTACCATTATTGCTGAGGTTGGTGACAAATGCAACATAACAGTGAAGGAATTAGTGAAAAAGCTGAGACTGACTCTGTTGAAGTCACCTCGCATCCAAGAGTGA 990 0.4192 MEVPWQSWISDSDVDDSDIFSQCHQNSFDEEEFLREILHQPSLSSETESHSSTIQNNSIPKLASSHKKPSSSSSPSTYILSFDNSTLIPAATHDTNYRKHRDSAPFNPTHKQLDITEPTLSSHLPTKPGLKNHNSSLTDQPKANQRSKKARSSSEALDHIVAERNRRQHLREKFIALAATIPGLKKIDKASILSEAVKHMKQLHERVKELEQQSKKTSVDEETTSDCEMMSSRDCYRLNEALPEVEARLLHKQIRIRIHCEKHPGIMLKILAHLQTLHFSVISNNVVPFGNSTLDITIIAEVGDKCNITVKELVKKLRLTLLKSPRIQE 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0142 329 Coils Coil 193 220 - -
Glsi07g0142 329 MobiDBLite consensus disorder prediction 118 143 - -
Glsi07g0142 329 Pfam Helix-loop-helix DNA-binding domain 159 204 IPR011598 GO:0046983
Glsi07g0142 329 PANTHER BHLH TRANSCRIPTION FACTOR 18 323 - -
Glsi07g0142 329 Gene3D - 140 219 IPR036638 GO:0046983
Glsi07g0142 329 MobiDBLite consensus disorder prediction 37 76 - -
Glsi07g0142 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 216 IPR036638 GO:0046983
Glsi07g0142 329 MobiDBLite consensus disorder prediction 118 156 - -
Glsi07g0142 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 203 IPR011598 GO:0046983
Glsi07g0142 329 SMART finulus 160 209 IPR011598 GO:0046983
Glsi07g0142 329 MobiDBLite consensus disorder prediction 40 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0142 Glsi-ChrGlsi07 881852 883184 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0142 1 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 30.994 2.94e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Glsi07g0142 HLH 6.4e-09 No_clan