Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0138 ATGCGTGCGGGAATAGGAGACTCCATCAACCTTTCTGCGGATTTATTGGCCGGGACAAACATAGCCGCTTTCACGCTTCTAAACCCTAACCTTCCGAAACCTCAACCATACGCCATGGCTCTACTTCTCCAATTCAGAACGAGAACCAAAAGGAACACTTTCACAAACCCTTCTCTGCTCCACCTCTTCTCTACTTCCAACTCCAACGACGATGAACCCGACTCTACCGCCACCGATGGTCCTGCCTCTCCAAACTCTAAATCTTCATTCTCATCCTACTTCAGCGATGTCAAGAAGGTGCTCAAACATGGCCAATCCACTTCACCGCCGTCGAGGCCCAGAAATCCTCTAACTCCATCTTCTACTGCTCCCGGTTCTTCGCCAACGAGGTCCTCCAAAGTTGATTCTTTAGAACAAATCCGAAAGGACCTGGCCGAGTTTCGGCGTCGTTCCTCTGATGCAGATTCGGCGCCTTTATCCTCATCGGGTCAAATCTCGTTTCAGGAGCTCTATAAAAGGAATGTGATAGGAAAACCCGGTGAATCGACGCCAAACGCTGATTTGGGGCCTGCAAAAGCCGGAGGCAGTCTCTCTGTTGATGCGATTCGTCAAAGCTTGCGGAATCTTCGACACTCTAGGAGTCCGCAGAGTGACAGGAAAGGCGTGGATCCTTTCTCGTCATCGGCATTTAGAGATAGTTTAAATTGGAAGACTTCAGGCTCCCCTGGTACTGGGACATCGTCAATGGTGATTGGTGGGATGGGAACATTGCCGGCGTCAATTTTTGGCAAGGAGATGAGGGAGAAGGAGGAGGGAGAGAGCTTGGAAGAAATGAAGACGGAGTTAGTGAAGAATTATAATCATGAGCAATTGGGAGACAAATTGAGGCAGCTGAGGCCGGAAGCAAAAGGAGGGAACTGGTTTTCTCTGCGGGAGCTGAACGAGAGGTTGATGAAATTGAAGGAAATGGAATTGAAGTTGAAGGAGACCGAGTCAAAACCTGGAGGGTCTTTCTTCAGAGAAGTGATACAAAACCTCCATAAAATAAAAATTACCAGTGATAATAAGTCCAAGAAAAGTTCGATGCAGAGAATTGACATATTGGGTGAGCTGGGCAGGACTCCAAGCTTCATGCTGCAGCCTCCTAAAGAGCATCTTGTTGAAAAGTATTTCCATCCGGATAATATGTCTTCGGCAGAAAAGTTGAAAATCGAGCTTGCTAAGGTTAGGGATGAGTTTAAAATGTCAGAGTCAGATTGTGGATCTGCTCGTGTTCAAGTTGCACAACTCACAACTAAGATTAAGCATCTATCATCAGTTCTACACAAGAAGGATAAGCATTCTCGTAAAGGTCTGCTAGCAATGGTTCAGATGAGGAAAAGGTTATTGAAATACCTCAGAAGAACTGACTGGGACTCATACTGTTTTGTGATTTCCAAGCTAGGTCTACGTGATAATCCAGATATTAAGTACTGA 1476 0.4621 MRAGIGDSINLSADLLAGTNIAAFTLLNPNLPKPQPYAMALLLQFRTRTKRNTFTNPSLLHLFSTSNSNDDEPDSTATDGPASPNSKSSFSSYFSDVKKVLKHGQSTSPPSRPRNPLTPSSTAPGSSPTRSSKVDSLEQIRKDLAEFRRRSSDADSAPLSSSGQISFQELYKRNVIGKPGESTPNADLGPAKAGGSLSVDAIRQSLRNLRHSRSPQSDRKGVDPFSSSAFRDSLNWKTSGSPGTGTSSMVIGGMGTLPASIFGKEMREKEEGESLEEMKTELVKNYNHEQLGDKLRQLRPEAKGGNWFSLRELNERLMKLKEMELKLKETESKPGGSFFREVIQNLHKIKITSDNKSKKSSMQRIDILGELGRTPSFMLQPPKEHLVEKYFHPDNMSSAEKLKIELAKVRDEFKMSESDCGSARVQVAQLTTKIKHLSSVLHKKDKHSRKGLLAMVQMRKRLLKYLRRTDWDSYCFVISKLGLRDNPDIKY 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0138 491 Gene3D - 451 486 - -
Glsi07g0138 491 Pfam Ribosomal protein S15 408 484 IPR000589 GO:0003735|GO:0005840|GO:0006412
Glsi07g0138 491 CDD Ribosomal_S15p_S13e 408 482 IPR000589 GO:0003735|GO:0005840|GO:0006412
Glsi07g0138 491 Coils Coil 399 419 - -
Glsi07g0138 491 MobiDBLite consensus disorder prediction 118 134 - -
Glsi07g0138 491 Gene3D - 402 449 - -
Glsi07g0138 491 MobiDBLite consensus disorder prediction 64 111 - -
Glsi07g0138 491 NCBIfam 30S ribosomal protein S15 407 484 IPR005290 GO:0003735|GO:0005840|GO:0006412
Glsi07g0138 491 PANTHER S15/NS1, RNA-BINDING PROTEIN 39 490 - -
Glsi07g0138 491 Hamap 30S ribosomal protein S15 [rpsO]. 396 485 IPR005290 GO:0003735|GO:0005840|GO:0006412
Glsi07g0138 491 SMART Ribosomal_S15_2 406 484 IPR000589 GO:0003735|GO:0005840|GO:0006412
Glsi07g0138 491 MobiDBLite consensus disorder prediction 231 251 - -
Glsi07g0138 491 MobiDBLite consensus disorder prediction 176 195 - -
Glsi07g0138 491 SUPERFAMILY S15/NS1 RNA-binding domain 406 485 IPR009068 -
Glsi07g0138 491 Coils Coil 310 333 - -
Glsi07g0138 491 MobiDBLite consensus disorder prediction 64 137 - -