Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0134 ATGAGATTCTTGGTGTGTAAGGGATTGGTGGAGGAGATGCTACCAGTGGGGGCGTTTGATCAAATGGATTGTCCCGTGAAGGATAGGTGGGGAAAGGCCATTCACCACAGCTTCCAAAAAGATATAGGTAAAATGGATCGCACTTCTGTCCTTTTATTGAAAAGTTCACGTGACATTTGTGATTTTATCCCACGTCCAGCAGATTTATCCGAGACAGAAGTCATTACAAAAGAAGAGTTGTCACATAATGACAAATCCATTATTAGCTACTGTGTCTGGTCAACAAATGCCATTCTACTTGCTGGGGTAGATCCTGCTGCATCCTCCGTTCCTGGGTCTCTTTCACTTTCTCAATCTTCTGCAAATACAGAAGATGAATCTCCAGGGATCGAGGAGGTCAGAAGAGGGCACCACCAGAACTTGAACAAGAGAATTCTAGTAGCACTGATTGTTTGTTCTACTCTTCTTTGTGGAATCTTCCTATTCTTGTCATATGTCTGGTTTCGTCGACATAAAATCTTAGAAGGGGCGGGTAGTAAAAGCCCTGAGACCATGGAAGCTGCAAAAGGAGGGTCTCTCAGCCCTTCTAACGTTAAACTTAATTACTCAAGGATGGTGGATAAGAAGAGTTCAGTTGCTATATTTGACTTTCAGTTATTAGAGGTTGCAACAAACAGCTTTTGCAAAAGTAATATTCTGGCTGAGAGTGGTTCTAGACTTGTCTACAGAGCTTGTTTTGATGAGCATTTCAAGGCAGCTGTGAAGAAAGCAGATATCAATGCTGATAGGGAATTTGAGAATGAAGTGAATTGGTTGAGCAAGATTCGACATCAGAATATTATAAAACTTCTTGGATATTGTATTCATGGTGAATCAAGGTTTCTTGTTTATGAAATGATGGAGAATGGATCTTTGGATACTCAGTTGCATGGGCCAAATCGCGGATCATCTTTAAATTGGTATCTCCGGTTAAGAATTGCTGTTGATGTTGCCAGAGCATTAGAATATCTCCATGAGCACTCCAATCCTCCTGTGGTTCATAGAGACCTAGAATCTTCTAATGTTCTTCTGGATTCTAACTTTAATGCCAAGCTATCAGATTTTGAACTTGCTGTGACTTCTGGAGTGCAAGACAAGAACATAAAGATGTCAGGAACTTTGGGTTATGTGGCACCAGAGTACATATCACACGGGAAGCTAACTGATAAGAGTGACGTATATGCTTTTGGGGTTGTCCTTTTAGAGCTTCTAACGGGGAGAAAAGCCATGGACAAAATGTCCTCAGACCAATACCAATCCATTGTGACATGGGCCATGCCTCAGCTAACTGACAGATCAAAGCTTCCAAGTATTCTGGATCCTGTAATCAGAAACACAATGGATTTGAAGCATTTATACCAGGTTGCTGCAGTGGCTGTTCTCTGTGTGCAACCAGAACCAAGCTATAGGCCGCTAATAACAGACGTCCTGCACTCCCTCATCCCTTTGGTACCCATTGAGCTGGGAGGGTCACTCAGAGTTTCAGAATCAGTCCGCTCTGAGTACTTGCAGTGA 1554 0.4234 MRFLVCKGLVEEMLPVGAFDQMDCPVKDRWGKAIHHSFQKDIGKMDRTSVLLLKSSRDICDFIPRPADLSETEVITKEELSHNDKSIISYCVWSTNAILLAGVDPAASSVPGSLSLSQSSANTEDESPGIEEVRRGHHQNLNKRILVALIVCSTLLCGIFLFLSYVWFRRHKILEGAGSKSPETMEAAKGGSLSPSNVKLNYSRMVDKKSSVAIFDFQLLEVATNSFCKSNILAESGSRLVYRACFDEHFKAAVKKADINADREFENEVNWLSKIRHQNIIKLLGYCIHGESRFLVYEMMENGSLDTQLHGPNRGSSLNWYLRLRIAVDVARALEYLHEHSNPPVVHRDLESSNVLLDSNFNAKLSDFELAVTSGVQDKNIKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGRKAMDKMSSDQYQSIVTWAMPQLTDRSKLPSILDPVIRNTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPIELGGSLRVSESVRSEYLQ 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0134 517 PANTHER OS01G0750732 PROTEIN 86 497 - -
Glsi07g0134 517 Pfam Protein tyrosine and serine/threonine kinase 248 450 IPR001245 GO:0004672|GO:0006468
Glsi07g0134 517 Gene3D Transferase(Phosphotransferase) domain 1 300 498 - -
Glsi07g0134 517 Gene3D Phosphorylase Kinase; domain 1 192 299 - -
Glsi07g0134 517 FunFam probable receptor-like protein kinase At1g80640 300 498 - -
Glsi07g0134 517 SUPERFAMILY Protein kinase-like (PK-like) 205 493 IPR011009 -
Glsi07g0134 517 ProSiteProfiles Protein kinase domain profile. 227 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0134 Glsi-ChrGlsi07 807294 812908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0134 103 439 Receptor kinase-like Gene Family AT1G80640 46.334 1.53e-101 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Glsi07g0134 PK_Tyr_Ser-Thr 1.5e-40 CL0016