Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0118 ATGGATTATTCATCATGGGTCAGCACTTCCTTGGATCTCAACATTAGACCTCTCAAAGTTCATGAAGAAGTTCCAAAAAAGGAGGTGGAAAGCAATTTTTTCTCATCGGGAAGGAAGTCTTCTGTAAAAGAAGAGCCACTTCAGTCCACAGGTGCCTTGGAGGAGGAACTGAAGCGGGTGAGTGCAGAAAACAAGAAGTTGACCGAAATGCTCACTGAGATGTGTGAGAATTACAATTCTCTGAGAAAACACTTGGCGGAATACATGAGAAAGAATCCAGAAAAGGATCTCACCCCATCAAAGAAAAGGAAGCCTGAAAGCACTAACAACAAGAGCAATCTGATGGGACTTAATGCAAACTCTGAGAGCTGCTCAACTGATGAAGAATCATGCAAGAAACCGAGAGAAGAGACCACCAAAGCGAAAGTTACCAGAGCTTATGTCAGGACCGAAGCATCTGATACAAGCCTTATTGTGAAGGACGGATATCAATGGAGGAAATATGGGCAAAAAGTGACCAGAGATAACCCTTGTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAAGCTGTCCCGTGAAAAAGAAGGTACAAAGAAGTGTGGATGATCAATCCATTCTTGTTGCAACTTATCAAGGGGAGCACAATCATCCTCACCCTTCTCAGATGGAGACAACATCAAGTACGAGCCGTTTTGGGAGCACAGGTTCGGCATCGACACTAACCTTTGACTTGACAAAATCTAAGTCCAGCAACACCAACAATACCAAGAACGCAAAACCGAAAATTGATTCCCCAGAAGTCCCGCAGGTTTTTGTGGAACAGATGGCTTCTTCCTTGACCAAAGATCCCAATTTTAGAGCAGCACTGGTTGCAGCCATTTCAGGAAGAATGCCGACCCACAAGAATTAA 912 0.4386 MDYSSWVSTSLDLNIRPLKVHEEVPKKEVESNFFSSGRKSSVKEEPLQSTGALEEELKRVSAENKKLTEMLTEMCENYNSLRKHLAEYMRKNPEKDLTPSKKRKPESTNNKSNLMGLNANSESCSTDEESCKKPREETTKAKVTRAYVRTEASDTSLIVKDGYQWRKYGQKVTRDNPCPRAYFKCSFAPSCPVKKKVQRSVDDQSILVATYQGEHNHPHPSQMETTSSTSRFGSTGSASTLTFDLTKSKSSNTNNTKNAKPKIDSPEVPQVFVEQMASSLTKDPNFRAALVAAISGRMPTHKN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0118 303 MobiDBLite consensus disorder prediction 109 125 - -
Glsi07g0118 303 SMART WRKY_cls 159 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi07g0118 303 MobiDBLite consensus disorder prediction 214 267 - -
Glsi07g0118 303 FunFam WRKY transcription factor 40 144 221 - -
Glsi07g0118 303 MobiDBLite consensus disorder prediction 86 108 - -
Glsi07g0118 303 Gene3D WRKY domain 137 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi07g0118 303 ProSiteProfiles WRKY domain profile. 154 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi07g0118 303 MobiDBLite consensus disorder prediction 86 137 - -
Glsi07g0118 303 MobiDBLite consensus disorder prediction 214 261 - -
Glsi07g0118 303 Pfam WRKY DNA -binding domain 160 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi07g0118 303 Coils Coil 50 77 - -
Glsi07g0118 303 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 15 298 IPR044810 GO:0003700
Glsi07g0118 303 SUPERFAMILY WRKY DNA-binding domain 156 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi07g0118 303 MobiDBLite consensus disorder prediction 28 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0118 Glsi-ChrGlsi07 710590 712095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0118 4 298 WRKY Transcription Factor Family AT1G80840 53.055 2.21e-97 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi07g0118 WRKY 4.4e-23 CL0274