Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0113 ATGGAACCTACACAGTCCGCCTCTCCTCCGAGGAACATCCTCTTCAACAAGTACGAGATAGGGAAACTCTTAGGCCAAGGCAATTTTGCAAAGGTCTACCATGGCAGAAACCTTATCACCAACGAAAGCGTAGCCATCAAGATTATCAAAAAAGAGAAGCTGGAGAAAGGAAAGCTCGTGAACCAAATCAAGCGCGAAGTCTCGGTGATGCGTTTGGTCCGGCACCCGCACATCGTTGAGCTGAATGAAGTCATGGCCACCAAAGGTAAAATCTTTCTGGTTATGGAGTATGTCAAAGGTGGGGAATTGTTCGCCAAAGTCAACAAGGGGAAGCTGACGGAAGATGTGGCCAGAAAATATTTCCAGCAATTGATCAGCGCCGTCGACTTCTGCCACAGCCGAGGAGTCACTCACCGTGACTTGAAACCTGAAAATTTGTTCTTGGACGAAAATGAAGATCTCAAAGTCTCCGACTTTGGGTTGTCGGCTTTGCCTGAGCAACGCCGATCCGACGGAATGCTGGTTACGCCGTGCGGGACGCCGGCTTATGTGGCACCAGAGGTGTTGAAGAAGAAAGGTTATGATGGGTCGAAAGCTGATATCTGGTCCTGTGGAGTAATTCTCTATGCTCTGCTTTCTGGGTATCTACCATTTCGAGGCGAGAATGTCATCAAGATTTATAAAAAGGCATTCAAAGCTGACTATATATTCCCAGAATGGATTTCACCGGAGGCAAAGAATTTGATTTCGAAATTACTAGTTGCTGACCCAGAAAAGAGGTATTCGATCCCAGATATTATGAAGGATCCTTGGTTTCAATATGGGTTCATGAGACCAATTGCATTTTCAGTGAAGGAGTCGGCTTTTGAGGTTAACCACGATGATATCAACGGCGAGGATAATAATGAAGAAGTGGAAATGGTAGGATCAGGAAAACCCACTCGTCCATTTTATAATGCATTTGAGATCATATCCTCGTTATCACATGGGTTCGATCTGAGAAGCTTGTTTGAGACAAGGAAGAGATCCCCATCGATGTTTATATCCAAGTTTTCAGCGTCGGCGGTGGTGGGAAAGCTTCAGGCAGTGGCGAAGAAGCTGAATTTTAGAATAACAGGGAAGAAGGAGTTCATGGTTAAAATGCAGGGGACAGAGGAGGGAAGAAAGGGGAAGTTGGCGATGACGGTGGAGGTGTTTGAGGTGGCGCCGGAGGTGGCTGTGGTGGAGTTTTGTAAGTCGGCGGGGGATACATTAGAGTACATCAAGTTCTGTGAGGACGAGGTGAGGCCTGCCCTGAAAGACATCGTCTGGAGCTGGCAGGGTGACACCAACTCATCAGTAACTCTAGGAGCCAATGGAGATTGA 1365 0.4703 MEPTQSASPPRNILFNKYEIGKLLGQGNFAKVYHGRNLITNESVAIKIIKKEKLEKGKLVNQIKREVSVMRLVRHPHIVELNEVMATKGKIFLVMEYVKGGELFAKVNKGKLTEDVARKYFQQLISAVDFCHSRGVTHRDLKPENLFLDENEDLKVSDFGLSALPEQRRSDGMLVTPCGTPAYVAPEVLKKKGYDGSKADIWSCGVILYALLSGYLPFRGENVIKIYKKAFKADYIFPEWISPEAKNLISKLLVADPEKRYSIPDIMKDPWFQYGFMRPIAFSVKESAFEVNHDDINGEDNNEEVEMVGSGKPTRPFYNAFEIISSLSHGFDLRSLFETRKRSPSMFISKFSASAVVGKLQAVAKKLNFRITGKKEFMVKMQGTEEGRKGKLAMTVEVFEVAPEVAVVEFCKSAGDTLEYIKFCEDEVRPALKDIVWSWQGDTNSSVTLGANGD 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0113 454 FunFam Non-specific serine/threonine protein kinase 314 437 - -
Glsi07g0113 454 SMART serkin_6 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0113 454 SUPERFAMILY Protein kinase-like (PK-like) 14 273 IPR011009 -
Glsi07g0113 454 Gene3D Transferase(Phosphotransferase) domain 1 11 317 - -
Glsi07g0113 454 Pfam NAF domain 317 372 IPR004041 GO:0007165
Glsi07g0113 454 Gene3D Kinase associated domain 1, KA1 318 438 - -
Glsi07g0113 454 FunFam Non-specific serine/threonine protein kinase 10 97 - -
Glsi07g0113 454 Pfam Protein kinase domain 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g0113 454 FunFam Non-specific serine/threonine protein kinase 11 313 - -
Glsi07g0113 454 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 10 433 - -
Glsi07g0113 454 CDD CIPK_C 319 433 - -
Glsi07g0113 454 ProSiteProfiles NAF domain profile. 313 338 IPR018451 GO:0007165
Glsi07g0113 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Glsi07g0113 454 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
Glsi07g0113 454 ProSiteProfiles Protein kinase domain profile. 18 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0113 Glsi-ChrGlsi07 695320 696684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0113 13 454 CBL-interacting serine-threonine protein kinases AT5G25110 61.086 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Glsi07g0113 Pkinase 3.3e-76 CL0016