Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0111 ATGGTAGTGAGTTCAGTCGTGAGAGAAAGAGAAAAGTTGCAAAAGGTTGTTGGTGTCCACTCTCGGGGTTATTCTGACCACCTTATTGTACTAGCTGCAGAAGATATGGCCGGCACAGGTTCGGCTTCTGGGCAGCCGCAATTCATTGCGAGCACAGGGAACCGAAGCTTTTCTAATGCGCCGTTGATTGACAACTCAGATACTGATCAAATCGTTGTACCTGATAGGAAAAGCTGGAAAAACTTATTTGCATACATGGGTCCTGGGTTTCTTGTCTCAATTGCATATATAGACCCAGGAAACTTTGAAACCGATCTCCAGGCAGGGGCACAATATAAATACGAGTTGCTTTGGATCATATTAGTGGCCTCGTGTGCTGCTCTTATAATCCAATCAATGGCAGCCAATCTGGGGGTTGTCACTGGAAAGCATTTAGCAGAGCACTGCAGAACTGAATATCCTGGGGTGTCTAACTTTATTCTTTGGATTATCGCTGAAATTGCCATAGTGGCCTGTGACATTCCTGAAGTGATTGGGACAGCCTTTGCATTGAACATGCTCTTCAATATACCTGTTTGGATTGGTGTTCTTCTGACAGGGCTCAGTACATTGATCCTCTTAGCATTGCAACAATATGGGGTTAGGAAACTGGAATTCTTGATTGCATTTCTGGTAATGACAATTGCTGCGTGCTTTTTTGTTGAGCTTGGGTACGCAAAGCCTGATACCAAAGAAGTTCTGAAGGGTCTTTTTATTCCACAACTTAAAGGGAGTGGTGCTACTGGTCTTGCGATTTCACTGCTTGGGGCTATGGTTATGCCCCACAATCTCTTCCTCCACTCAGCTCTGGTGCTTTCCAGGAAAATACCGCGATCAGTTCGTGGAATCAAAGAGGCATGCAGATTTTACACGATAGAAAGCGCCTTTGCTCTGATGGTGGCCTTCCTCATAAATATATCCGTTATTTCAGTAAGTGGTGCAATATGCAATTCTTCCAATTTGAATGCAGAAGATCAGAAGAGCTGTCAAGATTTGGATTTGAACAAAGCCTCCTTTCTACTAAGAAATGTCTTGGGCAAGTGGAGTTCAAAACTGTTTGGAATCGCTTTGCTCGCCTCAGGTCAAAGTTCTACTATAACAGGAACATATGCAGGGCAGTATGTCATGCAGGGATTTCTTGATTTACGACTAGAGCCCTGGATTCGGAACCTTTTGACTCGTTGCTTAGCCATAGTTCCCAGTTTGATTGTTGCAGTCATTGGTGGCTCTGCTGGGGCTGGGAAACTCATAATTATTGCATCAATGATCTTATCATTTGAGCTTCCTTTTGCTTTGATTCCACTCCTCAAGTTCACCAGCAGCAAAACCAAGATGGGACCAGCCTATGTCAACTCTTTGACGATTTCAGCTATTACTTGGATCATTGGTTCCCTCATCATAGCCATAAATATATTCTATTTACTGACTGGTTTTGTGGAGTTGCTTCTTCATAGCCACTTAAAAGTGGTAGCTAAGGTGTTTCTGGGCATAATAGGATTTTCTGGTATGGCAGTGTATTTGGGTGGTATTGCATATCTAGTGTTTCGGAAAAACAAAGAGGCTACACACCTTTTGGCCCTAACAACACCCGAAAGTCAGCAAATGGCAAATGAACAAGGCAATGGATCATCCATCTATTGTCTCCCAAGAGAAGACATAGTAAGCATGCAATTGCCTCAAAGAAGCACTCCAACAGATCTAATTGACTGA 1749 0.4328 MVVSSVVREREKLQKVVGVHSRGYSDHLIVLAAEDMAGTGSASGQPQFIASTGNRSFSNAPLIDNSDTDQIVVPDRKSWKNLFAYMGPGFLVSIAYIDPGNFETDLQAGAQYKYELLWIILVASCAALIIQSMAANLGVVTGKHLAEHCRTEYPGVSNFILWIIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLILLALQQYGVRKLEFLIAFLVMTIAACFFVELGYAKPDTKEVLKGLFIPQLKGSGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIKEACRFYTIESAFALMVAFLINISVISVSGAICNSSNLNAEDQKSCQDLDLNKASFLLRNVLGKWSSKLFGIALLASGQSSTITGTYAGQYVMQGFLDLRLEPWIRNLLTRCLAIVPSLIVAVIGGSAGAGKLIIIASMILSFELPFALIPLLKFTSSKTKMGPAYVNSLTISAITWIIGSLIIAINIFYLLTGFVELLLHSHLKVVAKVFLGIIGFSGMAVYLGGIAYLVFRKNKEATHLLALTTPESQQMANEQGNGSSIYCLPREDIVSMQLPQRSTPTDLID 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0111 582 NCBIfam Nramp family divalent metal transporter 87 455 - -
Glsi07g0111 582 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 61 535 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi07g0111 582 Pfam Natural resistance-associated macrophage protein 102 461 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi07g0111 582 PRINTS Natural resistance-associated macrophage protein signature 402 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi07g0111 582 PRINTS Natural resistance-associated macrophage protein signature 161 187 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi07g0111 582 PRINTS Natural resistance-associated macrophage protein signature 189 208 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi07g0111 582 PRINTS Natural resistance-associated macrophage protein signature 214 235 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi07g0111 582 PRINTS Natural resistance-associated macrophage protein signature 264 287 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi07g0111 582 PRINTS Natural resistance-associated macrophage protein signature 374 393 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi07g0111 582 PRINTS Natural resistance-associated macrophage protein signature 434 453 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi07g0111 582 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 81 458 IPR001046 GO:0016020|GO:0030001|GO:0046873
Glsi07g0111 582 Hamap Divalent metal cation transporter MntH [mntH]. 66 491 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g0111 Glsi-ChrGlsi07 688044 692007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0111 50 574 Inorganic Solute Cotransporters AT1G15960 78.937 0.0 862