Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g0110 ATGCCTGCCGCTGACACTTCATCCGCTTCCGGCCAAACCCTGTGTGTCACCGGCGCCGGGGGCTTCATAGCCTCTTGGATTGTGAAACTTCTCTTAGAGAAAGGCTACACTGTCAGAGGAACCGCACGAAACCCAGATGATCCTAAGAATGCACACTTGAAAGAGTTAGAAGGAGCCCAGGAGAGGTTAACTCTGCATAAAGTTGATCTTCTTGATCTTGATTCTGTTAAAGCTGCCATTAATGGTTGCGATGGTGTATTTCACACAGCCTCCCCAGTTACTGACAACCCAGAAGAGATGGTGGAGCCGGCCGTGAATGGCGCCAAGAATGTGATTGTGGCGGCTGCAGAATCAAAAGTAAGACGCGTGGTGTTCACTTCGTCTATTGGTGCAGTCTATATGGACCCTAATCGGAGCATCGATGTGGTCGTTGATGAGTCTTGTTGGAGTGATTTGGAGTATTGCAAAAATACCAAGAACTGGTATTGCTATGGAAAAGCTGTGGCTGAGCAAGCAGCATGGGACGAGGCAAAAGAGAAAGGGGTGGACTTGGTTGTGGTGAACCCAGTTTTGGTTCTTGGAGGATTGCTACAACCCACCATCAATGCTAGCACAATTCACATCCTCAAGTATCTCACTGGCTCTGCGAAGACCTATGCAAATGCTACTCAGGCTTATGTGCATGTTAAGGACGTGGCATTAGCCCATATTCTTGTTTTTGAGACACCATCTGCTTCTGGTCGATATCTATGTGCCGAAAGTTCGCTTCACCGTGGAGAGCTCGTTGAAATTCTGGCCAAGTATTTCCCGGAATACCCAATTCCTACCAGATGTTCAGATGAAAAGAATCCTAGAGCGAAGCCCCACATCTTCTCAAACCAAAAGCTGAAGGATTTGGGCTTGGAATTCACCCCCATAAGCCAGTGCCTGTACGACACCGTGAAGAGCCTGCAGGAGAAAGGTCATCTCTCTGTTCCCACAAAGCAAGAAGAACCTATTAAAATTGGATCCTAG 1014 0.4783 MPAADTSSASGQTLCVTGAGGFIASWIVKLLLEKGYTVRGTARNPDDPKNAHLKELEGAQERLTLHKVDLLDLDSVKAAINGCDGVFHTASPVTDNPEEMVEPAVNGAKNVIVAAAESKVRRVVFTSSIGAVYMDPNRSIDVVVDESCWSDLEYCKNTKNWYCYGKAVAEQAAWDEAKEKGVDLVVVNPVLVLGGLLQPTINASTIHILKYLTGSAKTYANATQAYVHVKDVALAHILVFETPSASGRYLCAESSLHRGELVEILAKYFPEYPIPTRCSDEKNPRAKPHIFSNQKLKDLGLEFTPISQCLYDTVKSLQEKGHLSVPTKQEEPIKIGS 337
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g0110 337 FunFam Cinnamoyl-CoA reductase 1 5 335 - -
Glsi07g0110 337 CDD FR_SDR_e 15 301 - -
Glsi07g0110 337 Gene3D - 3 336 - -
Glsi07g0110 337 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 314 - -
Glsi07g0110 337 Pfam NAD dependent epimerase/dehydratase family 15 245 IPR001509 -
Glsi07g0110 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 318 IPR036291 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi07g0110 Glsi-ChrGlsi07 683698 686531 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g0110 11 277 Monolignol Biosynthesis Gene Families AT1G80820 74.906 2.83e-145 409